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PAF1 PAF1 homolog, Paf1/RNA polymerase II complex component [ Bos taurus (domestic cattle) ]

Gene ID: 528744, updated on 4-Oct-2024

Summary

Official Symbol
PAF1provided by VGNC
Official Full Name
PAF1 homolog, Paf1/RNA polymerase II complex componentprovided by VGNC
Primary source
VGNC:VGNC:96701
See related
BGD:BT28794; Ensembl:ENSBTAG00000020428
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See PAF1 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (49086557..49091590, complement)

Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene glia maturation factor gamma Neighboring gene sterile alpha motif domain containing 4B Neighboring gene mediator complex subunit 29 Neighboring gene ZFP36 ring finger protein

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

Pathways from PubChem

General gene information

Clone Names

  • MGC129094

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II complex binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
part_of Cdc73/Paf1 complex IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
RNA polymerase II-associated factor 1 homolog
Names
Paf1, RNA polymerase II associated factor, homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001046293.1NP_001039758.1  RNA polymerase II-associated factor 1 homolog

    See identical proteins and their annotated locations for NP_001039758.1

    Status: PROVISIONAL

    Source sequence(s)
    BC105570
    UniProtKB/Swiss-Prot
    Q2KJ14
    Related
    ENSBTAP00000027224.6, ENSBTAT00000027224.7
    Conserved Domains (1) summary
    pfam03985
    Location:30443
    Paf1; Paf1

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    49086557..49091590 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)