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TENT4A terminal nucleotidyltransferase 4A [ Bos taurus (domestic cattle) ]

Gene ID: 523016, updated on 10-Oct-2024

Summary

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Official Symbol
TENT4Aprovided by VGNC
Official Full Name
terminal nucleotidyltransferase 4Aprovided by VGNC
Primary source
VGNC:VGNC:54566
See related
Ensembl:ENSBTAG00000003381
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
POLS; PAPD7
Orthologs
human mouse all
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Genomic context

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See TENT4A in Genome Data Viewer
Location:
chromosome: 20
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 20 NC_037347.1 (66450022..66491923, complement)

Chromosome 20 - NC_037347.1Genomic Context describing neighboring genes Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene odorant-binding protein-like Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037347.1 Chromosome 20 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables poly(A) RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TRAMP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
terminal nucleotidyltransferase 4A
Names
DNA polymerase sigma
poly(A) RNA polymerase D7, non-canonical
polymerase (DNA directed) sigma
NP_001153629.1
XP_005221725.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001160157.1 → NP_001153629.1  terminal nucleotidyltransferase 4A

    Status: VALIDATED

    Source sequence(s)
    AW463246, BE756808, DT807422, DT855254, NKLS02000020
    UniProtKB/TrEMBL
    E1BEH2
    Related
    ENSBTAP00000004384.6, ENSBTAT00000004384.6
    Conserved Domains (2) summary
    cd05402
    Location:10 → 121
    NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
    pfam03828
    Location:178 → 238
    PAP_assoc; Cid1 family poly A polymerase

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037347.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    66450022..66491923 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005221668.5 → XP_005221725.2  terminal nucleotidyltransferase 4A isoform X1

    Related
    ENSBTAP00000072642.2, ENSBTAT00000081260.2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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