GNPDA1 glucosamine-6-phosphate deaminase 1 [Bos taurus (domestic cattle)] - Gene

Summary

Official Symbol: GNPDA1provided by VGNC
Official Full Name: glucosamine-6-phosphate deaminase 1provided by VGNC
Primary source: VGNC:VGNC:29476
See related: BGD:BT10641; Ensembl:ENSBTAG00000007865
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as: GNPI
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 7

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2023_09	current	ARS-UCD2.0 (GCF_002263795.3)	7	NC_037334.1 (53066431..53077719, complement)

Chromosome 7 - NC_037334.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables glucosamine-6-phosphate deaminase activity	IEA Inferred from Electronic Annotation more info	PubMed
enables identical protein binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in N-acetylglucosamine catabolic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in N-acetylneuraminate catabolic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in carbohydrate metabolic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in glucosamine catabolic process	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: glucosamine-6-phosphate isomerase 1

Names: GNPDA 1; glcN6P deaminase 1; oscillin

NP_001073756.2

EC 3.5.99.6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001080287.3 → NP_001073756.2 glucosamine-6-phosphate isomerase 1

See identical proteins and their annotated locations for NP_001073756.2

Status: PROVISIONAL

Source sequence(s)

BC123566

UniProtKB/Swiss-Prot

A4FV08

UniProtKB/TrEMBL

A1L5B3

Related

ENSBTAP00000088790.1, ENSBTAT00000101396.1

Conserved Domains (1) summary

cl00339
Location:1 → 253

SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...