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COX2 cytochrome c oxidase subunit II [ Clupea harengus (Atlantic herring) ]

Gene ID: 5228440, updated on 18-Aug-2023

Summary

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Gene symbol
COX2
Gene description
cytochrome c oxidase subunit II
Locus tag
KEG55_p10
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Clupea harengus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea
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Genomic context

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See COX2 in Genome Data Viewer
Annotation release Status Assembly Chr Location
102 current Ch_v2.0.2 (GCF_900700415.2) MT (non-nuclear) NC_009577.1 (7182..7872)

Chromosome MT - NC_009577.1Genomic Context describing neighboring genes Neighboring gene tRNA-Ser Neighboring gene tRNA-Asp Neighboring gene tRNA-Lys Neighboring gene ATP synthase F0 subunit 8 Neighboring gene ATP synthase F0 subunit 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009577.1 Chromosome MT Reference Ch_v2.0.2 non-nuclear

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic relationships among anchovies, sardines, herrings and their relatives (Clupeiformes), inferred from whole mitogenome sequences. Lavoué S, et al. Mol Phylogenet Evol, 2007 Jun. PMID 17123838

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
cytochrome c oxidase subunit II
YP_001293661.1
  • TAA stop codon is completed by the addition of 3' A residues to the mRNA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009577.1 Reference assembly

    Range
    7182..7872
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001293661.1 cytochrome c oxidase subunit II (mitochondrion) [Clupea harengus]

    See identical proteins and their annotated locations for YP_001293661.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A5PI85, K9N8F7, K9NC27
    Conserved Domains (1) summary
    MTH00129
    Location:1 → 230
    COX2; cytochrome c oxidase subunit II; Provisional
Nucleotide Protein
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