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KLF10 KLF transcription factor 10 [ Bos taurus (domestic cattle) ]

Gene ID: 522795, updated on 10-Oct-2024

Summary

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Official Symbol
KLF10provided by VGNC
Official Full Name
KLF transcription factor 10provided by VGNC
Primary source
VGNC:VGNC:30627
See related
Ensembl:ENSBTAG00000014396
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
TIEG1
Orthologs
human mouse all
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Genomic context

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See KLF10 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 14 NC_037341.1 (61770393..61776508)

Chromosome 14 - NC_037341.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132342217 Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene uncharacterized LOC104974106 Neighboring gene outer dense fiber of sperm tails 1 Neighboring gene ubiquitin protein ligase E3 component n-recognin 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037341.1 Chromosome 14 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Krueppel-like factor 10
Names
Kruppel like factor 10
TGF-beta inducible early growth response protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001168462.1 → NP_001161934.1  Krueppel-like factor 10

    See identical proteins and their annotated locations for NP_001161934.1

    Status: PROVISIONAL

    Source sequence(s)
    AB530320
    UniProtKB/TrEMBL
    D0VZF7, F6QKI1
    Related
    ENSBTAP00000067318.1, ENSBTAT00000076027.2
    Conserved Domains (3) summary
    sd00017
    Location:377 → 396
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:432 → 454
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:418 → 441
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037341.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    61770393..61776508
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059893254.1 → XP_059749237.1  Krueppel-like factor 10 isoform X1

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials