U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

AJUBA ajuba LIM protein [ Bos taurus (domestic cattle) ]

Gene ID: 519937, updated on 4-Oct-2024

Summary

Go to the top of the page Help
Official Symbol
AJUBAprovided by VGNC
Official Full Name
ajuba LIM proteinprovided by VGNC
Primary source
VGNC:VGNC:25769
See related
BGD:BT30432; Ensembl:ENSBTAG00000012724
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
JUB
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See AJUBA in Genome Data Viewer
Location:
chromosome: 10
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (21862575..21872027)

Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene proteasome subunit beta 11 Neighboring gene proteasome 20S subunit beta 5 Neighboring gene chromosome 10 C14orf93 homolog Neighboring gene uncharacterized LOC132346347 Neighboring gene HAUS augmin like complex subunit 4 Neighboring gene transfer RNA arginine (anticodon ACG)

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of hippo signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of miRNA-mediated gene silencing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to hypoxia IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LIM domain-containing protein ajuba
Names
jub, ajuba homolog

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001192517.1 → NP_001179446.1  LIM domain-containing protein ajuba

    See identical proteins and their annotated locations for NP_001179446.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000010
    UniProtKB/Swiss-Prot
    E1BKA3
    UniProtKB/TrEMBL
    A0A3Q1MNN9
    Related
    ENSBTAP00000016915.5, ENSBTAT00000016915.7
    Conserved Domains (3) summary
    cd09352
    Location:348 → 401
    LIM1_Ajuba_like; The first LIM domain of Ajuba-like proteins
    cd09355
    Location:413 → 465
    LIM2_Ajuba_like; The second LIM domain of Ajuba-like proteins
    cd09438
    Location:473 → 534
    LIM3_Ajuba_like; The third LIM domain of Ajuba-like proteins

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    21862575..21872027
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024997545.2 → XP_024853313.1  LIM domain-containing protein ajuba isoform X1

    Conserved Domains (1) summary
    cl02475
    Location:46 → 107
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
E1BKA3.1 GenPept UniProtKB/Swiss-Prot:E1BKA3

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.