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SLC17A7 solute carrier family 17 member 7 [ Bos taurus (domestic cattle) ]

Gene ID: 518849, updated on 4-Oct-2024

Summary

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Official Symbol
SLC17A7provided by VGNC
Official Full Name
solute carrier family 17 member 7provided by VGNC
Primary source
VGNC:VGNC:34702
See related
Ensembl:ENSBTAG00000007036
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See SLC17A7 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (55889117..55900355, complement)

Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene KASH domain containing 5 Neighboring gene U6 spliceosomal RNA Neighboring gene parathyroid hormone 2 Neighboring gene golgi associated olfactory signaling regulator Neighboring gene PIH1 domain containing 1 Neighboring gene aldehyde dehydrogenase 16 family member A1 Neighboring gene fms related receptor tyrosine kinase 3 ligand

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-glutamate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neurotransmitter transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic anion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neurotransmitter loading into synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of synapse structure or activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, glutamatergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in excitatory synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vesicular glutamate transporter 1
Names
VGluT1
solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001098046.1 → NP_001091515.1  vesicular glutamate transporter 1

    See identical proteins and their annotated locations for NP_001091515.1

    Status: PROVISIONAL

    Source sequence(s)
    BC123750
    UniProtKB/Swiss-Prot
    A4FV52
    UniProtKB/TrEMBL
    A0AAA9SJV8
    Related
    ENSBTAP00000009255.5, ENSBTAT00000009255.7
    Conserved Domains (1) summary
    cd17382
    Location:66 → 490
    MFS_SLC17A6_7_8_VGluT; Solute carrier family 17 members 6, 7, and 8 (also called Vesicular glutamate transporters) of the Major Facilitator Superfamily of transporters

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    55889117..55900355 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A4FV52.1 GenPept UniProtKB/Swiss-Prot:A4FV52

Gene LinkOut

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