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SNX29 sorting nexin 29 [ Bos taurus (domestic cattle) ]

Gene ID: 518366, updated on 10-Oct-2024

Summary

Official Symbol
SNX29provided by VGNC
Official Full Name
sorting nexin 29provided by VGNC
Primary source
VGNC:VGNC:35106
See related
BGD:BT23248; Ensembl:ENSBTAG00000026371
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See SNX29 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 25 NC_037352.1 (10682176..11279623)

Chromosome 25 - NC_037352.1Genomic Context describing neighboring genes Neighboring gene TNF receptor superfamily member 17 Neighboring gene small ribosomal subunit protein eS1-like Neighboring gene G1 to S phase transition 1 Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene calcineurin like phosphoesterase domain containing 1 Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene uncharacterized LOC132343842 Neighboring gene shisa family member 9

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037352.1 Chromosome 25 Reference ARS-UCD2.0 Primary Assembly

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001076862.1NP_001070330.1  sorting nexin-29

    See identical proteins and their annotated locations for NP_001070330.1

    Status: PROVISIONAL

    Source sequence(s)
    BC123533
    UniProtKB/Swiss-Prot
    Q08DX0
    UniProtKB/TrEMBL
    A0A3Q1N0T4
    Related
    ENSBTAP00000062382.2, ENSBTAT00000069611.2
    Conserved Domains (3) summary
    cd07277
    Location:660777
    PX_RUN; The phosphoinositide binding Phox Homology domain of uncharacterized proteins containing PX and RUN domains
    pfam02759
    Location:45180
    RUN; RUN domain
    pfam10211
    Location:478543
    Ax_dynein_light; Axonemal dynein light chain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037352.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    10682176..11279623
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024984883.2XP_024840651.1  sorting nexin-29 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1N0T4
    Conserved Domains (3) summary
    cd07277
    Location:652769
    PX_RUN; The phosphoinositide binding Phox Homology domain of uncharacterized proteins containing PX and RUN domains
    pfam02759
    Location:37170
    RUN; RUN domain
    cl25632
    Location:475630
    type_I_hlyD; type I secretion membrane fusion protein, HlyD family
  2. XM_059881310.1XP_059737293.1  sorting nexin-29 isoform X1

  3. XM_024984882.2XP_024840650.1  sorting nexin-29 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1N0T4
    Conserved Domains (3) summary
    cd07277
    Location:652769
    PX_RUN; The phosphoinositide binding Phox Homology domain of uncharacterized proteins containing PX and RUN domains
    pfam02759
    Location:37170
    RUN; RUN domain
    cl25632
    Location:475630
    type_I_hlyD; type I secretion membrane fusion protein, HlyD family
  4. XM_024984884.2XP_024840652.1  sorting nexin-29 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1N0T4
    Conserved Domains (3) summary
    cd07277
    Location:652769
    PX_RUN; The phosphoinositide binding Phox Homology domain of uncharacterized proteins containing PX and RUN domains
    pfam02759
    Location:37170
    RUN; RUN domain
    cl25632
    Location:475630
    type_I_hlyD; type I secretion membrane fusion protein, HlyD family