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cox2 cytochrome c oxidase subunit 2 [ Fusarium graminearum ]

Gene ID: 5183111, updated on 18-Aug-2023

Summary

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Gene symbol
cox2
Gene description
cytochrome c oxidase subunit 2
Locus tag
GizefMp06
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Fusarium graminearum
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium
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Genomic context

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Sequence:
Chromosome: MT; NC_009493.1 (30589..35835)

Chromosome MT - NC_009493.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase subunit 3 Neighboring gene ATP synthase subunit 9 Neighboring gene tRNA-Arg Neighboring gene tRNA-Arg

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009493.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of Fusarium mitochondrial genomes reveals a highly variable region that encodes an exceptionally large open reading frame. Al-Reedy RM, et al. Fungal Genet Biol, 2012 Jan. PMID 22178648

GeneRIFs: Gene References Into Functions

General protein information

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Names
cytochrome c oxidase subunit 2
LAGLIDADG endonuclease
GIY endonuclease
YP_001249310.1
  • in frame with upstream exon

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009493.1 Reference assembly

    Range
    30589..35835
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001249308.1 cytochrome c oxidase subunit 2 (mitochondrion) [Fusarium graminearum]

    See identical proteins and their annotated locations for YP_001249308.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0E3SWY7, A0A3T1FYA8, A5J041
    Conserved Domains (1) summary
    MTH00154
    Location:15 → 248
    COX2; cytochrome c oxidase subunit II; Provisional

  2. YP_001249309.1 LAGLIDADG endonuclease (mitochondrion) [Fusarium graminearum]

    See identical proteins and their annotated locations for YP_001249309.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A6G6BBB6, A0A6G6BDR8, A5J042
    Conserved Domains (1) summary
    pfam00961
    Location:17 → 115
    LAGLIDADG_1; LAGLIDADG endonuclease

  3. YP_001249310.1 GIY endonuclease, partial (mitochondrion) [Fusarium graminearum]

    See identical proteins and their annotated locations for YP_001249310.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0E3SX36, A5J043
    Conserved Domains (3) summary
    cd10445
    Location:59 → 145
    GIY-YIG_bI1_like; Catalytic GIY-YIG domain of putative intron-encoded endonuclease bI1 and similar proteins
    cd00283
    Location:162 → 289
    GIY-YIG_Cterm; GIYX(10-11)YIG family of class I homing endonucleases C-terminus (GIY-YIG_Cterm). Homing endonucleases promote the mobility of intron or intein by recognizing and cleaving a homologous allele that lacks the sequence. They catalyze a double-strand break ...
    TIGR01453
    Location:58 → 291
    grpIintron_endo; group I intron endonuclease

  4. YP_001249311.1 GIY endonuclease (mitochondrion) [Fusarium graminearum]

    See identical proteins and their annotated locations for YP_001249311.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A5J044
    Conserved Domains (1) summary
    cl15257
    Location:116 → 175
    GIY-YIG_SF; GIY-YIG nuclease domain superfamily
Nucleotide Protein
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