CATSPER2 cation channel sperm associated 2 [Bos taurus (domestic cattle)] - Gene

Summary

Official Symbol: CATSPER2provided by VGNC
Official Full Name: cation channel sperm associated 2provided by VGNC
Primary source: VGNC:VGNC:26794
See related: BGD:BT30236; Ensembl:ENSBTAG00000032130
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 21

Exon count:: 14

Annotation release	Status	Assembly	Chr	Location
RS_2023_09	current	ARS-UCD2.0 (GCF_002263795.3)	21	NC_037348.1 (55352583..55370789, complement)

Chromosome 21 - NC_037348.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_037348.1 Chromosome 21 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables calcium-activated cation channel activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in fertilization	IEA Inferred from Electronic Annotation more info	PubMed
involved_in flagellated sperm motility	IEA Inferred from Electronic Annotation more info	PubMed
involved_in monoatomic ion transport	IEA Inferred from Electronic Annotation more info	PubMed
involved_in sperm capacitation	IEA Inferred from Electronic Annotation more info	PubMed
involved_in transmembrane transport	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of CatSper complex	IEA Inferred from Electronic Annotation more info	PubMed
located_in membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: cation channel sperm-associated protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001192477.1 → NP_001179406.1 cation channel sperm-associated protein 2

See identical proteins and their annotated locations for NP_001179406.1

Status: PROVISIONAL

Source sequence(s)

NKLS02000021

UniProtKB/TrEMBL

E1BGU6

Related

ENSBTAP00000042959.3, ENSBTAT00000045580.4

Conserved Domains (1) summary

pfam00520
Location:164 → 350

Ion_trans; Ion transport protein

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

NC_037348.1 Reference ARS-UCD2.0 Primary Assembly

Range

55352583..55370789 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_015459327.3 → XP_015314813.1 cation channel sperm-associated protein 2 isoform X1

UniProtKB/TrEMBL

E1BGU6

Conserved Domains (1) summary

pfam00520
Location:164 → 350

Ion_trans; Ion transport protein
XM_059879059.1 → XP_059735042.1 cation channel sperm-associated protein 2 isoform X1

UniProtKB/TrEMBL

E1BGU6
XM_059879060.1 → XP_059735043.1 cation channel sperm-associated protein 2 isoform X2