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ALDH18A1 aldehyde dehydrogenase 18 family member A1 [ Bos taurus (domestic cattle) ]

Gene ID: 514759, updated on 4-Oct-2024

Summary

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Official Symbol
ALDH18A1provided by VGNC
Official Full Name
aldehyde dehydrogenase 18 family member A1provided by VGNC
Primary source
VGNC:VGNC:25807
See related
BGD:BT13688; Ensembl:ENSBTAG00000011832
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See ALDH18A1 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 26 NC_037353.1 (17088635..17129757, complement)

Chromosome 26 - NC_037353.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101903400 Neighboring gene PDZ and LIM domain 1 Neighboring gene sorbin and SH3 domain containing 1 Neighboring gene uncharacterized LOC132343942 Neighboring gene 60S ribosomal protein L27 pseudogene Neighboring gene uncharacterized LOC101903992 Neighboring gene tectonic family member 3 Neighboring gene ectonucleoside triphosphate diphosphohydrolase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037353.1 Chromosome 26 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Clone Names

  • MGC127306

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamate 5-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamate-5-semialdehyde dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proline biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-1-pyrroline-5-carboxylate synthase
Names
aldehyde dehydrogenase 18A1
NP_001039646.1
XP_005225594.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001046181.1 → NP_001039646.1  delta-1-pyrroline-5-carboxylate synthase

    See identical proteins and their annotated locations for NP_001039646.1

    Status: PROVISIONAL

    Source sequence(s)
    BC105337
    UniProtKB/TrEMBL
    A0AAA9TEY6, Q2KJH7
    Related
    ENSBTAP00000015703.2, ENSBTAT00000015703.4
    Conserved Domains (1) summary
    cl25378
    Location:64 → 794
    ProB; Glutamate 5-kinase [Amino acid transport and metabolism]

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037353.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    17088635..17129757 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005225537.5 → XP_005225594.1  delta-1-pyrroline-5-carboxylate synthase isoform X1

    See identical proteins and their annotated locations for XP_005225594.1

    UniProtKB/TrEMBL
    A0AAA9TEY6
    Conserved Domains (1) summary
    cl25378
    Location:64 → 792
    ProB; Glutamate 5-kinase [Amino acid transport and metabolism]
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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