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RCI_RS10735 transposase [ Methanocella arvoryzae MRE50 ]

Gene ID: 5145270, updated on 22-Oct-2024

Summary

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Gene symbol
RCI_RS10735
Gene description
transposase
Locus tag
RCI_RS10735
Gene type
protein coding
Organism
Methanocella arvoryzae MRE50 (strain: MRE50, type-material: type strain of Methanocella arvoryzae)
Lineage
Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella
Old locus tag
RCIX648
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Genomic context

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Sequence:
NC_009464.1 (2163481..2164467, complement)

NC_009464.1Genomic Context describing neighboring genes Neighboring gene alpha/beta hydrolase Neighboring gene type I glutamate--ammonia ligase Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009464.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structural analysis of insertion sequence IS5. Kröger M, et al. Nature, 1982 May 13. PMID 6281654
  2. Nucleotide sequence analysis of IS427 and its target sites in Agrobacterium tumefaciens T37. De Meirsman C, et al. Plasmid, 1990 Nov. PMID 1963949
  3. Nucleotide sequence of IS402 from Pseudomonas cepacia. Ferrante AA, et al. Gene, 1991 Jun 15. PMID 1650732
  4. The three-dimensional structure of a Tn5 transposase-related protein determined to 2.9-A resolution. Davies DR, et al. J Biol Chem, 1999 Apr 23. PMID 10207011
  5. IS421, a new insertion sequence in Escherichia coli. Sato S, et al. FEBS Lett, 1989 May 22. PMID 2542093

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
transposase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009464.1 Reference assembly

    Range
    2163481..2164467 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_012034999.1 transposase [Methanocella arvoryzae]

    See identical proteins and their annotated locations for WP_012034999.1

    UniProtKB/TrEMBL
    Q0W0V8, Q0W207
    Conserved Domains (2) summary
    pfam01609
    Location:136 → 308
    DDE_Tnp_1; Transposase DDE domain
    pfam05598
    Location:50 → 108
    DUF772; Transposase domain (DUF772)
Nucleotide Protein
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