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XKR8 XK related 8 [ Bos taurus (domestic cattle) ]

Gene ID: 514365, updated on 4-Oct-2024

Summary

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Official Symbol
XKR8provided by VGNC
Official Full Name
XK related 8provided by VGNC
Primary source
VGNC:VGNC:36990
See related
BGD:BT17736; Ensembl:ENSBTAG00000008800
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See XKR8 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (125393198..125400355, complement)

Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene EYA transcriptional coactivator and phosphatase 3 Neighboring gene translationally-controlled tumor protein-like Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like 3 Neighboring gene uncharacterized LOC112443407 Neighboring gene sphingomyelin phosphodiesterase acid like 3B Neighboring gene replication protein A2 Neighboring gene thymocyte selection associated family member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in apoptotic process involved in development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in engulfment of apoptotic cell IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylserine exposure on apoptotic cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
XK-related protein 8
Names
XK, Kell blood group complex subunit-related family, member 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    125393198..125400355 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002685687.6 → XP_002685733.1  XK-related protein 8

    See identical proteins and their annotated locations for XP_002685733.1

    UniProtKB/TrEMBL
    E1BD69
    Related
    ENSBTAP00000011592.4, ENSBTAT00000011592.6
    Conserved Domains (1) summary
    pfam09815
    Location:15 → 344
    XK-related; XK-related protein
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases
Research Materials