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TALDO1 transaldolase 1 [ Bos taurus (domestic cattle) ]

Gene ID: 513453, updated on 4-Oct-2024

Summary

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Official Symbol
TALDO1provided by VGNC
Official Full Name
transaldolase 1provided by VGNC
Primary source
VGNC:VGNC:35590
See related
BGD:BT11081; Ensembl:ENSBTAG00000010336
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See TALDO1 in Genome Data Viewer
Location:
chromosome: 29
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 29 NC_037356.1 (50591286..50598649, complement)

Chromosome 29 - NC_037356.1Genomic Context describing neighboring genes Neighboring gene cell cycle exit and neuronal differentiation 1 Neighboring gene glutamine amidotransferase class 1 domain containing 1 Neighboring gene uncharacterized LOC101903832 Neighboring gene EPS8 like 2 Neighboring gene uncharacterized LOC112444919

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037356.1 Chromosome 29 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. Sonstegard TS, et al. Mamm Genome, 2002 Jul. PMID 12140684
  2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Clone Names

  • MGC133714

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transaldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt, non-oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transaldolase
NP_001030360.2
XP_005227396.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001035283.2 → NP_001030360.2  transaldolase

    See identical proteins and their annotated locations for NP_001030360.2

    Status: VALIDATED

    Source sequence(s)
    BC109965, DT841281, DY082666
    UniProtKB/Swiss-Prot
    Q2TBL6
    UniProtKB/TrEMBL
    G5E5C8
    Related
    ENSBTAP00000013650.3, ENSBTAT00000013650.5
    Conserved Domains (2) summary
    PRK05269
    Location:11 → 329
    PRK05269; transaldolase B; Provisional
    PTZ00411
    Location:11 → 330
    PTZ00411; transaldolase-like protein; Provisional

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037356.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    50591286..50598649 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005227339.5 → XP_005227396.1  transaldolase isoform X1

    UniProtKB/Swiss-Prot
    Q2TBL6
    Conserved Domains (2) summary
    PRK05269
    Location:11 → 327
    PRK05269; transaldolase B; Provisional
    PTZ00411
    Location:11 → 327
    PTZ00411; transaldolase-like protein; Provisional
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2TBL6.1 GenPept UniProtKB/Swiss-Prot:Q2TBL6

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.