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FASTKD3 FAST kinase domains 3 [ Bos taurus (domestic cattle) ]

Gene ID: 513260, updated on 4-Oct-2024

Summary

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Official Symbol
FASTKD3provided by VGNC
Official Full Name
FAST kinase domains 3provided by VGNC
Primary source
VGNC:VGNC:28875
See related
BGD:BT14365; Ensembl:ENSBTAG00000009400
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See FASTKD3 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 20 NC_037347.1 (65343180..65354788)

Chromosome 20 - NC_037347.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC132343253 Neighboring gene 5-methyltetrahydrofolate-homocysteine methyltransferase reductase Neighboring gene cilia and flagella associated protein 90 Neighboring gene adenylate cyclase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037347.1 Chromosome 20 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Fast kinase domain-containing protein 3 is a mitochondrial protein essential for cellular respiration. Simarro M, et al. Biochem Biophys Res Commun, 2010 Oct 22. PMID 20869947, Free PMC Article
  2. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
  3. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
  4. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC5297

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mitochondrial mRNA stability IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribonucleoprotein granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
FAST kinase domain-containing protein 3, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001024528.2 → NP_001019699.2  FAST kinase domain-containing protein 3, mitochondrial

    See identical proteins and their annotated locations for NP_001019699.2

    Status: VALIDATED

    Source sequence(s)
    NKLS02000020
    UniProtKB/Swiss-Prot
    Q58CX2
    UniProtKB/TrEMBL
    A0AAA9SIH8
    Related
    ENSBTAP00000082353.1, ENSBTAT00000112981.1
    Conserved Domains (3) summary
    smart00952
    Location:593 → 650
    RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
    pfam06743
    Location:409 → 477
    FAST_1; FAST kinase-like protein, subdomain 1
    pfam08368
    Location:493 → 579
    FAST_2; FAST kinase-like protein, subdomain 2

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037347.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    65343180..65354788
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005221646.5 → XP_005221703.1  FAST kinase domain-containing protein 3, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_005221703.1

    UniProtKB/Swiss-Prot
    Q58CX2
    UniProtKB/TrEMBL
    A0AAA9SIH8
    Related
    ENSBTAP00000043394.4, ENSBTAT00000046066.5
    Conserved Domains (3) summary
    smart00952
    Location:593 → 650
    RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
    pfam06743
    Location:409 → 477
    FAST_1; FAST kinase-like protein, subdomain 1
    pfam08368
    Location:493 → 579
    FAST_2; FAST kinase-like protein, subdomain 2

RNA

  1. XR_239001.5 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q58CX2.2 GenPept UniProtKB/Swiss-Prot:Q58CX2

Gene LinkOut

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Molecular Biology Databases
Research Materials