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TUT7 terminal uridylyl transferase 7 [ Bos taurus (domestic cattle) ]

Gene ID: 513209, updated on 10-Oct-2024

Summary

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Official Symbol
TUT7provided by VGNC
Official Full Name
terminal uridylyl transferase 7provided by VGNC
Primary source
VGNC:VGNC:37121
See related
BGD:BT20558; Ensembl:ENSBTAG00000001737
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
ZCCHC6
Orthologs
human mouse all
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Genomic context

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See TUT7 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 8 NC_037335.1 (79462397..79523806, complement)

Chromosome 8 - NC_037335.1Genomic Context describing neighboring genes Neighboring gene chromosome 8 C9orf153 homolog Neighboring gene iron-sulfur cluster assembly 1 Neighboring gene uncharacterized LOC104969425 Neighboring gene small nucleolar RNA SNORA70 Neighboring gene growth arrest specific 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037335.1 Chromosome 8 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA uridylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA 3' uridylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
terminal uridylyltransferase 7
Names
zinc finger CCHC-type containing 6
NP_001192681.1
XP_005210441.1
XP_024851421.1
XP_059745032.1
XP_059745033.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001205752.2 → NP_001192681.1  terminal uridylyltransferase 7

    See identical proteins and their annotated locations for NP_001192681.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000008
    UniProtKB/TrEMBL
    A0AAA9RWN3, A0AAA9SIZ0
    Related
    ENSBTAP00000083889.1, ENSBTAT00000110996.1
    Conserved Domains (4) summary
    cd05402
    Location:315 → 427
    NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
    smart00343
    Location:1455 → 1471
    ZnF_C2HC; zinc finger
    pfam16631
    Location:1374 → 1453
    TUTF7_u4; Unstructured region 4 on terminal uridylyltransferase 7
    cl27230
    Location:982 → 1313
    PAP_assoc; Cid1 family poly A polymerase

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037335.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    79462397..79523806 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005210384.4 → XP_005210441.1  terminal uridylyltransferase 7 isoform X2

    UniProtKB/TrEMBL
    A0AAA9S0V3, E1BAR2
    Related
    ENSBTAP00000078602.1, ENSBTAT00000120712.1
    Conserved Domains (4) summary
    cd05402
    Location:315 → 427
    NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
    smart00343
    Location:1455 → 1471
    ZnF_C2HC; zinc finger
    pfam16631
    Location:1374 → 1453
    TUTF7_u4; Unstructured region 4 on terminal uridylyltransferase 7
    cl27230
    Location:982 → 1313
    PAP_assoc; Cid1 family poly A polymerase

  2. XM_024995653.2 → XP_024851421.1  terminal uridylyltransferase 7 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1NM24, E1BAR2
    Related
    ENSBTAP00000073576.2, ENSBTAT00000085249.2
    Conserved Domains (4) summary
    cd05402
    Location:315 → 427
    NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
    smart00343
    Location:1455 → 1471
    ZnF_C2HC; zinc finger
    pfam16631
    Location:1374 → 1453
    TUTF7_u4; Unstructured region 4 on terminal uridylyltransferase 7
    cl27230
    Location:982 → 1313
    PAP_assoc; Cid1 family poly A polymerase

  3. XM_059889049.1 → XP_059745032.1  terminal uridylyltransferase 7 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1NM24

  4. XM_059889050.1 → XP_059745033.1  terminal uridylyltransferase 7 isoform X3

RNA

  1. XR_009495454.1 RNA Sequence

  2. XR_009495453.1 RNA Sequence

  3. XR_009495455.1 RNA Sequence

  4. XR_009495457.1 RNA Sequence

  5. XR_009495456.1 RNA Sequence

  6. XR_009495451.1 RNA Sequence

  7. XR_009495452.1 RNA Sequence

  8. XR_009495458.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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