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FAM149A family with sequence similarity 149 member A [ Bos taurus (domestic cattle) ]

Gene ID: 512887, updated on 10-Oct-2024

Summary

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Official Symbol
FAM149Aprovided by VGNC
Official Full Name
family with sequence similarity 149 member Aprovided by VGNC
Primary source
VGNC:VGNC:55045
See related
BGD:BT27377; Ensembl:ENSBTAG00000034393
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See FAM149A in Genome Data Viewer
Location:
chromosome: 27
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 27 NC_037354.1 (16200836..16244221)

Chromosome 27 - NC_037354.1Genomic Context describing neighboring genes Neighboring gene sorbin and SH3 domain containing 2 Neighboring gene uncharacterized LOC112444648 Neighboring gene uncharacterized LOC132344049 Neighboring gene toll like receptor 3 Neighboring gene uncharacterized LOC101905390 Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene cytochrome P450 family 4 subfamily V member 2 Neighboring gene kallikrein B1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037354.1 Chromosome 27 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC151606

General protein information

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Preferred Names
protein FAM149A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001101965.1 → NP_001095435.1  protein FAM149A

    See identical proteins and their annotated locations for NP_001095435.1

    Status: PROVISIONAL

    Source sequence(s)
    BC149139
    UniProtKB/TrEMBL
    A6QP41
    Conserved Domains (1) summary
    pfam12516
    Location:2 → 66
    DUF3719; Protein of unknown function (DUF3719)

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037354.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    16200836..16244221
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059882205.1 → XP_059738188.1  protein FAM149A isoform X3

  2. XM_005225976.5 → XP_005226033.2  protein FAM149A isoform X4

    UniProtKB/TrEMBL
    A0A3Q1NMI9
    Conserved Domains (2) summary
    pfam12516
    Location:338 → 402
    DUF3719; Protein of unknown function (DUF3719)
    cl26464
    Location:53 → 208
    Atrophin-1; Atrophin-1 family

  3. XM_005225975.5 → XP_005226032.2  protein FAM149A isoform X2

    UniProtKB/TrEMBL
    A0A3Q1NMI9
    Conserved Domains (1) summary
    pfam12516
    Location:338 → 402
    DUF3719; Protein of unknown function (DUF3719)

  4. XM_005225973.5 → XP_005226030.2  protein FAM149A isoform X1

    UniProtKB/TrEMBL
    A0A3Q1NMI9
    Related
    ENSBTAP00000004650.7, ENSBTAT00000004650.7
    Conserved Domains (1) summary
    pfam12516
    Location:338 → 402
    DUF3719; Protein of unknown function (DUF3719)

  5. XM_005225977.5 → XP_005226034.2  protein FAM149A isoform X5

    UniProtKB/TrEMBL
    A0A3Q1LH09
    Related
    ENSBTAP00000057897.2, ENSBTAT00000070699.2
    Conserved Domains (1) summary
    pfam12516
    Location:108 → 172
    DUF3719; Protein of unknown function (DUF3719)

  6. XM_059882206.1 → XP_059738189.1  protein FAM149A isoform X6

  7. XM_059882207.1 → XP_059738190.1  protein FAM149A isoform X6

Nucleotide Protein Strain
Heading Accession and Version

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