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HMGN2 high mobility group nucleosomal binding domain 2 [ Bos taurus (domestic cattle) ]

Gene ID: 512161, updated on 4-Oct-2024

Summary

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Official Symbol
HMGN2provided by VGNC
Official Full Name
high mobility group nucleosomal binding domain 2provided by VGNC
Primary source
VGNC:VGNC:50536
See related
BGD:BT27624
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See HMGN2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (126660981..126664547, complement)

Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S6 kinase A1 Neighboring gene GTP-binding nuclear protein Ran-like Neighboring gene dehydrodolichyl diphosphate synthase subunit Neighboring gene lin-28 homolog A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Immunolocalization of the high-mobility group N2 protein and acetylated histone H3K14 in early developing parthenogenetic bovine embryos derived from oocytes of high and low developmental competence. Bastos GM, et al. Mol Reprod Dev, 2008 Feb. PMID 17712799
  2. The partial amino acid sequence of a non-histone chromosomal protein. Walker JM, et al. Biochem Biophys Res Commun, 1976 Nov 8. PMID 793593
  3. The primary structure of a non-histone chromosomal protein. Walker JM, et al. Eur J Biochem, 1977 Jun 15. PMID 330164
  4. Studies on the conformational properties of the high-mobility-group chromosomal protein HMG 17 and its interaction with DNA. Abercrombie BD, et al. Eur J Biochem, 1978 Mar. PMID 565710
  5. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Rate of positive nuclei in early-cleaved embryos from small-versus large-follicles is similar for HMGN2 after parthenogenesis.
    Title: Immunolocalization of the high-mobility group N2 protein and acetylated histone H3K14 in early developing parthenogenetic bovine embryos derived from oocytes of high and low developmental competence.
Submit: New GeneRIF Correction

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleosomal DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
non-histone chromosomal protein HMG-17
Names
high mobility group nucleosome-binding domain-containing protein 2
nonhistone chromosomal protein HMG-17

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001098945.1 → NP_001092415.1  non-histone chromosomal protein HMG-17

    See identical proteins and their annotated locations for NP_001092415.1

    Status: PROVISIONAL

    Source sequence(s)
    BC142241
    UniProtKB/Swiss-Prot
    A5PJU3, P02313
    Conserved Domains (1) summary
    pfam01101
    Location:2 → 86
    HMG14_17; HMG14 and HMG17

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    126660981..126664547 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P02313.2 GenPept UniProtKB/Swiss-Prot:P02313

Gene LinkOut

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