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EXTL1 exostosin like glycosyltransferase 1 [ Bos taurus (domestic cattle) ]

Gene ID: 511060, updated on 4-Oct-2024

Summary

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Official Symbol
EXTL1provided by VGNC
Official Full Name
exostosin like glycosyltransferase 1provided by VGNC
Primary source
VGNC:VGNC:28667
See related
BGD:BT22160; Ensembl:ENSBTAG00000006349
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See EXTL1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (127052889..127070883, complement)

Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 63 Neighboring gene solute carrier family 30 member 2 Neighboring gene platelet activating factor acetylhydrolase 2 Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene stathmin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-like 1
Names
exostoses (multiple)-like 1
exostoses-like 1
NP_001093807.1
XP_005203164.1
XP_010800837.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001100337.1 → NP_001093807.1  exostosin-like 1

    See identical proteins and their annotated locations for NP_001093807.1

    Status: PROVISIONAL

    Source sequence(s)
    BC150061
    UniProtKB/TrEMBL
    A0A3Q1LR06, A6QR03
    Related
    ENSBTAP00000008330.4, ENSBTAT00000008330.6
    Conserved Domains (2) summary
    pfam03016
    Location:93 → 333
    Exostosin; Exostosin family
    pfam09258
    Location:417 → 650
    Glyco_transf_64; Glycosyl transferase family 64 domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    127052889..127070883 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010802535.4 → XP_010800837.1  exostosin-like 1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1LR06, A0A3Q1MC47
    Related
    ENSBTAP00000071673.1, ENSBTAT00000083482.2
    Conserved Domains (2) summary
    pfam03016
    Location:93 → 333
    Exostosin; Exostosin family
    pfam09258
    Location:417 → 668
    Glyco_transf_64; Glycosyl transferase family 64 domain

  2. XM_005203107.5 → XP_005203164.1  exostosin-like 1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1LR06
    Conserved Domains (2) summary
    pfam03016
    Location:93 → 333
    Exostosin; Exostosin family
    pfam09258
    Location:417 → 576
    Glyco_transf_64; Glycosyl transferase family 64 domain

RNA

  1. XR_805138.4 RNA Sequence

  2. XR_805137.4 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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