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CHRAC1 chromatin accessibility complex subunit 1 [ Bos taurus (domestic cattle) ]

Gene ID: 510942, updated on 4-Oct-2024

Summary

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Official Symbol
CHRAC1provided by VGNC
Official Full Name
chromatin accessibility complex subunit 1provided by VGNC
Primary source
VGNC:VGNC:27315
See related
BGD:BT24136; Ensembl:ENSBTAG00000020226
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See CHRAC1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 14 NC_037341.1 (3153152..3156397, complement)

Chromosome 14 - NC_037341.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine kinase 2 Neighboring gene uncharacterized LOC132342171 Neighboring gene uncharacterized LOC132342172 Neighboring gene argonaute RISC catalytic component 2 Neighboring gene trafficking protein particle complex subunit 9 Neighboring gene microRNA mir-12027 Neighboring gene uncharacterized LOC132342173

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037341.1 Chromosome 14 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC142339

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CHRAC IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chromatin accessibility complex protein 1
Names
chromatin accessibility complex 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001075478.1 → NP_001068946.1  chromatin accessibility complex protein 1

    See identical proteins and their annotated locations for NP_001068946.1

    Status: PROVISIONAL

    Source sequence(s)
    BC120142
    UniProtKB/TrEMBL
    Q0P5E8
    Related
    ENSBTAP00000026936.3, ENSBTAT00000026936.5
    Conserved Domains (1) summary
    cl28542
    Location:15 → 97
    BUR6; Class 2 transcription repressor NC2, alpha subunit (DRAP1 homolog) [Transcription]

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037341.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    3153152..3156397 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials