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XPO6 exportin 6 [ Bos taurus (domestic cattle) ]

Gene ID: 510797, updated on 4-Oct-2024

Summary

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Official Symbol
XPO6provided by VGNC
Official Full Name
exportin 6provided by VGNC
Primary source
VGNC:VGNC:37000
See related
BGD:BT18834; Ensembl:ENSBTAG00000010309
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See XPO6 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 25 NC_037352.1 (25620586..25727651, complement)

Chromosome 25 - NC_037352.1Genomic Context describing neighboring genes Neighboring gene katanin interacting protein Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene GSG1 like Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene proline-rich protein 13-like Neighboring gene SH3 domain binding kinase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037352.1 Chromosome 25 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear export signal receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exportin-6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037352.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    25620586..25727651 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024985303.2 → XP_024841071.2  exportin-6 isoform X2

  2. XM_002698080.7 → XP_002698126.2  exportin-6 isoform X1

    See identical proteins and their annotated locations for XP_002698126.2

    UniProtKB/TrEMBL
    F1MI29
    Related
    ENSBTAP00000013621.5, ENSBTAT00000013621.6
    Conserved Domains (2) summary
    smart00913
    Location:31 → 96
    IBN_N; Importin-beta N-terminal domain
    pfam08389
    Location:103 → 253
    Xpo1; Exportin 1-like protein
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases
Research Materials