WDR46 WD repeat domain 46 [Bos taurus (domestic cattle)] - Gene

Summary

Official Symbol: WDR46provided by VGNC
Official Full Name: WD repeat domain 46provided by VGNC
Primary source: VGNC:VGNC:36902
See related: BGD:BT11294; Ensembl:ENSBTAG00000016824
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as: C6orf11
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 23

Exon count:: 15

Annotation release	Status	Assembly	Chr	Location
RS_2023_09	current	ARS-UCD2.0 (GCF_002263795.3)	23	NC_037350.1 (7453803..7463139, complement)

Chromosome 23 - NC_037350.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_037350.1 Chromosome 23 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Markers

D6S1234E (e-PCR)
- UniSTS:8047

CC591860 (e-PCR)
- UniSTS:476827

MARC_4031-4032 (e-PCR)
- UniSTS:269308

MARC_4031-4032:996679288:1 (e-PCR)
- UniSTS:269308

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of 90S preribosome	IEA Inferred from Electronic Annotation more info	PubMed
located_in nucleolus	IEA Inferred from Electronic Annotation more info	PubMed
part_of small-subunit processome	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: WD repeat-containing protein 46

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001015564.1 → NP_001015564.1 WD repeat-containing protein 46

See identical proteins and their annotated locations for NP_001015564.1

Status: PROVISIONAL

Source sequence(s)

BT020687

UniProtKB/TrEMBL

A4IFF2, Q5EA82

Related

ENSBTAP00000022381.3, ENSBTAT00000022381.5

Conserved Domains (4) summary

smart01033
Location:435 → 513

BING4CT; BING4CT (NUC141) domain

COG2319
Location:198 → 385

WD40; WD40 repeat [General function prediction only]

sd00039
Location:194 → 230

7WD40; WD40 repeat [structural motif]

cl02567
Location:194 → 452

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...