ATG3 autophagy related 3 [Bos taurus (domestic cattle)] - Gene

Summary

Official Symbol: ATG3provided by VGNC
Official Full Name: autophagy related 3provided by VGNC
Primary source: VGNC:VGNC:26256
See related: BGD:BT13656; Ensembl:ENSBTAG00000009084
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
RS_2023_09	current	ARS-UCD2.0 (GCF_002263795.3)	1	NC_037328.1 (57309112..57343709, complement)

Chromosome 1 - NC_037328.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_037328.1 Chromosome 1 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables Atg8-family ligase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in autophagosome assembly	IEA Inferred from Electronic Annotation more info	PubMed
involved_in autophagy of mitochondrion	IEA Inferred from Electronic Annotation more info	PubMed
involved_in nucleophagy	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of cytoplasmic ubiquitin ligase complex	IEA Inferred from Electronic Annotation more info	PubMed
located_in cytosol	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: ubiquitin-like-conjugating enzyme ATG3

Names: ATG3 autophagy related 3 homolog; autophagy-related protein 3

NP_001068832.1

EC 2.3.2.-

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001075364.1 → NP_001068832.1 ubiquitin-like-conjugating enzyme ATG3

See identical proteins and their annotated locations for NP_001068832.1

Status: PROVISIONAL

Source sequence(s)

BC120110

UniProtKB/Swiss-Prot

Q0VCL3

UniProtKB/TrEMBL

A0A3Q1LYS7

Related

ENSBTAP00000011976.3, ENSBTAT00000011976.4

Conserved Domains (2) summary

pfam03986
Location:8 → 135

Autophagy_N; Autophagocytosis associated protein (Atg3), N-terminal domain

pfam03987
Location:38 → 308

Autophagy_act_C; Autophagocytosis associated protein, active-site domain