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STT3A STT3 oligosaccharyltransferase complex catalytic subunit A [ Bos taurus (domestic cattle) ]

Gene ID: 507815, updated on 12-Oct-2024

Summary

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Official Symbol
STT3Aprovided by VGNC
Official Full Name
STT3 oligosaccharyltransferase complex catalytic subunit Aprovided by VGNC
Primary source
VGNC:VGNC:35427
See related
BGD:BT22345; Ensembl:ENSBTAG00000007203
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See STT3A in Genome Data Viewer
Location:
chromosome: 29
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 29 NC_037356.1 (29006087..29027284)

Chromosome 29 - NC_037356.1Genomic Context describing neighboring genes Neighboring gene fasciculation and elongation protein zeta 1 Neighboring gene EI24 autophagy associated transmembrane protein Neighboring gene checkpoint kinase 1 Neighboring gene acrosomal vesicle protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037356.1 Chromosome 29 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. Sonstegard TS, et al. Mamm Genome, 2002 Jul. PMID 12140684
  2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC127291

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in post-translational protein modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
Names
STT3, subunit of the oligosaccharyltransferase complex, homolog A
STT3-A
STT3A, catalytic subunit of the oligosaccharyltransferase complex
integral membrane protein 1
oligosaccharyl transferase subunit STT3A
NP_001039445.1
XP_005226848.1
XP_015316673.1
XP_059738799.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001045980.2 → NP_001039445.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A

    See identical proteins and their annotated locations for NP_001039445.1

    Status: PROVISIONAL

    Source sequence(s)
    BC105328
    UniProtKB/Swiss-Prot
    Q2KJI2
    UniProtKB/TrEMBL
    A7E3T4
    Related
    ENSBTAP00000090483.1, ENSBTAT00000099610.1
    Conserved Domains (1) summary
    pfam02516
    Location:17 → 484
    STT3; Oligosaccharyl transferase STT3 subunit

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037356.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    29006087..29027284
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015461187.3 → XP_015316673.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A isoform X1

    UniProtKB/Swiss-Prot
    Q2KJI2
    UniProtKB/TrEMBL
    A7E3T4
    Conserved Domains (1) summary
    pfam02516
    Location:17 → 484
    STT3; Oligosaccharyl transferase STT3 subunit

  2. XM_059882816.1 → XP_059738799.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A isoform X1

    UniProtKB/Swiss-Prot
    Q2KJI2
    Related
    ENSBTAP00000009477.6, ENSBTAT00000009477.7

  3. XM_005226791.5 → XP_005226848.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A isoform X1

    See identical proteins and their annotated locations for XP_005226848.1

    UniProtKB/Swiss-Prot
    Q2KJI2
    UniProtKB/TrEMBL
    A7E3T4
    Conserved Domains (1) summary
    pfam02516
    Location:17 → 484
    STT3; Oligosaccharyl transferase STT3 subunit
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2KJI2.1 GenPept UniProtKB/Swiss-Prot:Q2KJI2

Gene LinkOut

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Research Materials