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RPL10a putative 60S ribosomal protein L10a [ Leishmania infantum JPCM5 ]

Gene ID: 5073741, updated on 30-Oct-2024

Summary

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Gene symbol
RPL10a
Gene description
putative 60S ribosomal protein L10a
Locus tag
LINJ_36_3950
Gene type
protein coding
RNA name
putative 60S ribosomal protein L10a
RefSeq status
PROVISIONAL
Organism
Leishmania infantum JPCM5 (strain: JPCM5)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
Orthologs
Leishmania major all
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Genomic context

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Location:
chromosome: 36
Exon count:
1
Sequence:
Chromosome: 36; NC_009420.2 (1435981..1436625)

Chromosome 36 - NC_009420.2Genomic Context describing neighboring genes Neighboring gene putative 60S ribosomal protein L34 Neighboring gene putative 40S ribosomal protein S27-1 Neighboring gene putative basic transcription factor 3a Neighboring gene conserved hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009420.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomic analysis of three Leishmania species that cause diverse human disease. Peacock CS, et al. Nat Genet, 2007 Jul. PMID 17572675, Free PMC Article
  2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
putative 60S ribosomal protein L10a

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009420.2 Reference assembly

    Range
    1435981..1436625
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001469602.1 → XP_001469639.1  putative 60S ribosomal protein L10a [Leishmania infantum JPCM5]

    See identical proteins and their annotated locations for XP_001469639.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2K4YRV6, A0A381MWS3, A0A6L0XAA5, A4HXT8
    Conserved Domains (1) summary
    PTZ00225
    Location:1 → 214
    PTZ00225; 60S ribosomal protein L10a; Provisional
Nucleotide Protein
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