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Dkkl1 dickkopf-like 1 [ Mus musculus (house mouse) ]

Gene ID: 50722, updated on 2-Nov-2024

Summary

Official Symbol
Dkkl1provided by MGI
Official Full Name
dickkopf-like 1provided by MGI
Primary source
MGI:MGI:1354963
See related
Ensembl:ENSMUSG00000030792 AllianceGenome:MGI:1354963
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
SGY; SGY1; mSgy; SGY-1; Soggy
Summary
Predicted to enable co-receptor binding activity and receptor antagonist activity. Involved in negative regulation of testosterone biosynthetic process; penetration of zona pellucida; and positive regulation of apoptotic process. Acts upstream of or within canonical Wnt signaling pathway and positive regulation of fat cell differentiation. Located in acrosomal vesicle. Is expressed in several structures, including extraembryonic component and reproductive system. Orthologous to human DKKL1 (dickkopf like acrosomal protein 1). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Restricted expression toward testis adult (RPKM 329.0) See more
Orthologs
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Genomic context

See Dkkl1 in Genome Data Viewer
Location:
7 B3; 7 29.19 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (44856949..44861592, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (45207525..45212165, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E1733 Neighboring gene STARR-seq mESC enhancer starr_18832 Neighboring gene parathyroid hormone 2 Neighboring gene KASH domain containing 5 Neighboring gene predicted gene, 31097 Neighboring gene STARR-positive B cell enhancer ABC_E10438 Neighboring gene TEA domain family member 2 Neighboring gene STARR-seq mESC enhancer starr_18834 Neighboring gene STARR-positive B cell enhancer ABC_E872 Neighboring gene STARR-seq mESC enhancer starr_18835 Neighboring gene CD37 antigen

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General protein information

Preferred Names
dickkopf-like protein 1
Names
protein soggy-1
soggy 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_015789.3NP_056604.2  dickkopf-like protein 1 precursor

    See identical proteins and their annotated locations for NP_056604.2

    Status: VALIDATED

    Source sequence(s)
    AK131694, BE134426, CA466481
    Consensus CDS
    CCDS21235.1
    UniProtKB/Swiss-Prot
    Q9EQT4, Q9ERW0, Q9ERW1, Q9QZL9
    UniProtKB/TrEMBL
    Q3V2N2
    Related
    ENSMUSP00000033057.8, ENSMUST00000033057.9

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    44856949..44861592 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006540985.5XP_006541048.1  dickkopf-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A1B0GRV4
    Related
    ENSMUSP00000147678.2, ENSMUST00000210741.2