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PIGL phosphatidylinositol glycan anchor biosynthesis class L [ Bos taurus (domestic cattle) ]

Gene ID: 507080, updated on 4-Oct-2024

Summary

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Official Symbol
PIGLprovided by VGNC
Official Full Name
phosphatidylinositol glycan anchor biosynthesis class Lprovided by VGNC
Primary source
VGNC:VGNC:32871
See related
BGD:BT24769; Ensembl:ENSBTAG00000013273
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See PIGL in Genome Data Viewer
Location:
chromosome: 19
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (33276808..33326705, complement)

Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene enhancer of rudimentary homolog pseudogene Neighboring gene ubiquitin B Neighboring gene uncharacterized LOC104975044 Neighboring gene centromere protein V Neighboring gene nuclear receptor corepressor 1 Neighboring gene uncharacterized LOC132342975 Neighboring gene tetratricopeptide repeat domain 19 Neighboring gene zinc finger SWIM-type containing 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosaminylphosphatidylinositol deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase
Names
PIG-L
phosphatidylinositol-glycan biosynthesis class L protein
NP_001093781.1
XP_005220388.1
XP_024835574.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001100311.2 → NP_001093781.1  N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase

    See identical proteins and their annotated locations for NP_001093781.1

    Status: PROVISIONAL

    Source sequence(s)
    BC149604
    UniProtKB/Swiss-Prot
    A6QQ24
    Related
    ENSBTAP00000017653.3, ENSBTAT00000017653.4
    Conserved Domains (1) summary
    pfam02585
    Location:46 → 166
    PIG-L; GlcNAc-PI de-N-acetylase

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    33276808..33326705 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024979806.2 → XP_024835574.1  N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase isoform X1

    UniProtKB/TrEMBL
    A0AAA9RTE8
    Related
    ENSBTAP00000075148.1, ENSBTAT00000107778.1
    Conserved Domains (1) summary
    pfam02585
    Location:46 → 166
    PIG-L; GlcNAc-PI de-N-acetylase

  2. XM_005220331.5 → XP_005220388.1  N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase isoform X2

    UniProtKB/TrEMBL
    A0AAA9TN81
    Related
    ENSBTAP00000099813.1, ENSBTAT00000092871.1
    Conserved Domains (1) summary
    pfam02585
    Location:46 → 166
    PIG-L; GlcNAc-PI de-N-acetylase
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A6QQ24.1 GenPept UniProtKB/Swiss-Prot:A6QQ24

Gene LinkOut

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