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LINJ_16_0210 mitochondrial ornithine carrier protein-like protein [ Leishmania infantum JPCM5 ]

Gene ID: 5067905, updated on 30-Oct-2024

Summary

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Gene symbol
LINJ_16_0210
Gene description
mitochondrial ornithine carrier protein-like protein
Locus tag
LINJ_16_0210
Gene type
protein coding
RNA name
mitochondrial ornithine carrier protein-like protein
RefSeq status
PROVISIONAL
Organism
Leishmania infantum JPCM5 (strain: JPCM5)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
Orthologs
Leishmania major all
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Genomic context

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Location:
chromosome: 16
Exon count:
1
Sequence:
Chromosome: 16; NC_009400.2 (73983..74882, complement)

Chromosome 16 - NC_009400.2Genomic Context describing neighboring genes Neighboring gene conserved hypothetical protein Neighboring gene conserved hypothetical protein Neighboring gene mitochondrial ornithine transporter 1-like protein Neighboring gene hypothetical protein, unknown function

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009400.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomic analysis of three Leishmania species that cause diverse human disease. Peacock CS, et al. Nat Genet, 2007 Jul. PMID 17572675, Free PMC Article
  2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
mitochondrial ornithine carrier protein-like protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009400.2 Reference assembly

    Range
    73983..74882 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001464473.1 → XP_001464510.1  mitochondrial ornithine carrier protein-like protein [Leishmania infantum JPCM5]

    See identical proteins and their annotated locations for XP_001464510.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2K4YQQ3, A0A381ME80, A0A6L0X542, A4HWR9
    Conserved Domains (1) summary
    pfam00153
    Location:190 → 282
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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