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ZMYND11 zinc finger MYND-type containing 11 [ Bos taurus (domestic cattle) ]

Gene ID: 506325, updated on 10-Oct-2024

Summary

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Official Symbol
ZMYND11provided by VGNC
Official Full Name
zinc finger MYND-type containing 11provided by VGNC
Primary source
VGNC:VGNC:37202
See related
BGD:BT23268; Ensembl:ENSBTAG00000002578
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See ZMYND11 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 13 NC_037340.1 (46836946..46912506, complement)

Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene disco interacting protein 2 homolog C Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA SNORD31 Neighboring gene prion protein Neighboring gene prion like protein doppel

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037340.1 Chromosome 13 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Clone Names

  • MGC137432

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger MYND domain-containing protein 11
Names
zinc finger, MYND domain containing 11

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001045940.2 → NP_001039405.2  zinc finger MYND domain-containing protein 11

    See identical proteins and their annotated locations for NP_001039405.2

    Status: VALIDATED

    Source sequence(s)
    BC114147, DV821746, EH131135, EV728832
    UniProtKB/TrEMBL
    F6RWK9, Q29RJ3
    Related
    ENSBTAP00000039148.4, ENSBTAT00000039353.4
    Conserved Domains (3) summary
    cd05841
    Location:218 → 299
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:104 → 204
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    pfam01753
    Location:509 → 544
    zf-MYND; MYND finger

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037340.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    46836946..46912506 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005214449.5 → XP_005214506.1  zinc finger MYND domain-containing protein 11 isoform X3

    See identical proteins and their annotated locations for XP_005214506.1

    UniProtKB/TrEMBL
    F6RWK9, Q29RJ3
    Conserved Domains (3) summary
    cd05841
    Location:218 → 299
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:104 → 204
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    pfam01753
    Location:509 → 544
    zf-MYND; MYND finger

  2. XM_005214447.5 → XP_005214504.1  zinc finger MYND domain-containing protein 11 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1LJL9, A0A3Q1MYF3
    Related
    ENSBTAP00000069786.2, ENSBTAT00000080964.2
    Conserved Domains (4) summary
    cd05841
    Location:272 → 353
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:158 → 258
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    cd15537
    Location:102 → 145
    PHD_BS69; PHD finger found in protein BS69
    pfam01753
    Location:563 → 598
    zf-MYND; MYND finger

  3. XM_005214444.5 → XP_005214501.1  zinc finger MYND domain-containing protein 11 isoform X1

    See identical proteins and their annotated locations for XP_005214501.1

    UniProtKB/TrEMBL
    A0A3Q1MYF3, E1BN04
    Related
    ENSBTAP00000003338.7, ENSBTAT00000003338.7
    Conserved Domains (4) summary
    cd05841
    Location:287 → 368
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:173 → 273
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    cd15537
    Location:117 → 160
    PHD_BS69; PHD finger found in protein BS69
    pfam01753
    Location:578 → 613
    zf-MYND; MYND finger

  4. XM_005214450.5 → XP_005214507.1  zinc finger MYND domain-containing protein 11 isoform X3

    See identical proteins and their annotated locations for XP_005214507.1

    UniProtKB/TrEMBL
    F6RWK9, Q29RJ3
    Conserved Domains (3) summary
    cd05841
    Location:218 → 299
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:104 → 204
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    pfam01753
    Location:509 → 544
    zf-MYND; MYND finger

  5. XM_025000403.2 → XP_024856171.1  zinc finger MYND domain-containing protein 11 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1LJL9, A0A3Q1MYF3
    Conserved Domains (4) summary
    cd05841
    Location:272 → 353
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:158 → 258
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    cd15537
    Location:102 → 145
    PHD_BS69; PHD finger found in protein BS69
    pfam01753
    Location:563 → 598
    zf-MYND; MYND finger

  6. XM_005214445.5 → XP_005214502.1  zinc finger MYND domain-containing protein 11 isoform X1

    See identical proteins and their annotated locations for XP_005214502.1

    UniProtKB/TrEMBL
    A0A3Q1MYF3, E1BN04
    Conserved Domains (4) summary
    cd05841
    Location:287 → 368
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:173 → 273
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    cd15537
    Location:117 → 160
    PHD_BS69; PHD finger found in protein BS69
    pfam01753
    Location:578 → 613
    zf-MYND; MYND finger

  7. XM_025000404.2 → XP_024856172.1  zinc finger MYND domain-containing protein 11 isoform X3

    UniProtKB/TrEMBL
    F6RWK9, Q29RJ3
    Conserved Domains (3) summary
    cd05841
    Location:218 → 299
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:104 → 204
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    pfam01753
    Location:509 → 544
    zf-MYND; MYND finger

  8. XM_025000401.2 → XP_024856169.1  zinc finger MYND domain-containing protein 11 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1LJL9, A0A3Q1MYF3
    Conserved Domains (4) summary
    cd05841
    Location:272 → 353
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:158 → 258
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    cd15537
    Location:102 → 145
    PHD_BS69; PHD finger found in protein BS69
    pfam01753
    Location:563 → 598
    zf-MYND; MYND finger

  9. XM_025000399.2 → XP_024856167.1  zinc finger MYND domain-containing protein 11 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MYF3, E1BN04
    Conserved Domains (4) summary
    cd05841
    Location:287 → 368
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:173 → 273
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    cd15537
    Location:117 → 160
    PHD_BS69; PHD finger found in protein BS69
    pfam01753
    Location:578 → 613
    zf-MYND; MYND finger

  10. XM_025000400.2 → XP_024856168.1  zinc finger MYND domain-containing protein 11 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MYF3, E1BN04
    Conserved Domains (4) summary
    cd05841
    Location:287 → 368
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:173 → 273
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    cd15537
    Location:117 → 160
    PHD_BS69; PHD finger found in protein BS69
    pfam01753
    Location:578 → 613
    zf-MYND; MYND finger

  11. XM_025000402.2 → XP_024856170.1  zinc finger MYND domain-containing protein 11 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1LJL9, A0A3Q1MYF3
    Related
    ENSBTAP00000056744.2, ENSBTAT00000075167.2
    Conserved Domains (4) summary
    cd05841
    Location:272 → 353
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:158 → 258
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    cd15537
    Location:102 → 145
    PHD_BS69; PHD finger found in protein BS69
    pfam01753
    Location:563 → 598
    zf-MYND; MYND finger

  12. XM_005214446.5 → XP_005214503.1  zinc finger MYND domain-containing protein 11 isoform X1

    See identical proteins and their annotated locations for XP_005214503.1

    UniProtKB/TrEMBL
    A0A3Q1MYF3, E1BN04
    Conserved Domains (4) summary
    cd05841
    Location:287 → 368
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:173 → 273
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    cd15537
    Location:117 → 160
    PHD_BS69; PHD finger found in protein BS69
    pfam01753
    Location:578 → 613
    zf-MYND; MYND finger

  13. XM_025000406.2 → XP_024856174.1  zinc finger MYND domain-containing protein 11 isoform X4

    UniProtKB/TrEMBL
    A0AAA9RXJ2
    Conserved Domains (4) summary
    cd05841
    Location:197 → 278
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:83 → 183
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    cd15537
    Location:27 → 70
    PHD_BS69; PHD finger found in protein BS69
    pfam01753
    Location:488 → 523
    zf-MYND; MYND finger

  14. XM_005214452.5 → XP_005214509.1  zinc finger MYND domain-containing protein 11 isoform X4

    See identical proteins and their annotated locations for XP_005214509.1

    UniProtKB/TrEMBL
    A0AAA9RXJ2
    Conserved Domains (4) summary
    cd05841
    Location:197 → 278
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:83 → 183
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    cd15537
    Location:27 → 70
    PHD_BS69; PHD finger found in protein BS69
    pfam01753
    Location:488 → 523
    zf-MYND; MYND finger

  15. XM_059892477.1 → XP_059748460.1  zinc finger MYND domain-containing protein 11 isoform X5

  16. XM_059892478.1 → XP_059748461.1  zinc finger MYND domain-containing protein 11 isoform X5

Nucleotide Protein Strain
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