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DNM3 dynamin 3 [ Bos taurus (domestic cattle) ]

Gene ID: 506315, updated on 10-Oct-2024

Summary

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Official Symbol
DNM3provided by VGNC
Official Full Name
dynamin 3provided by VGNC
Primary source
VGNC:VGNC:106714
See related
Ensembl:ENSBTAG00000014319
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See DNM3 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 16 NC_037343.1 (39259078..39910251)

Chromosome 16 - NC_037343.1Genomic Context describing neighboring genes Neighboring gene vesicle associated membrane protein 4 Neighboring gene methyltransferase 13, eEF1A lysine and N-terminal methyltransferase Neighboring gene uncharacterized LOC132342463 Neighboring gene microRNA mir-199a-1 Neighboring gene microRNA mir-3120 Neighboring gene microRNA mir-214 Neighboring gene chromosome 16 C1orf105 homolog Neighboring gene transfer RNA tyrosine (anticodon GUA) Neighboring gene phosphatidylinositol glycan anchor biosynthesis class C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037343.1 Chromosome 16 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dynamin-3
NP_001230213.1
XP_005216941.1
XP_005216946.1
XP_024831888.1
XP_059731275.1
XP_059731276.1
XP_059731277.1
XP_059731278.1
XP_059731279.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001243284.2 → NP_001230213.1  dynamin-3

    Status: VALIDATED

    Source sequence(s)
    BC151753, BM106351, CK775372, DV876706, NKLS02000016
    UniProtKB/TrEMBL
    A0A3Q1M0E8, A0A3Q1MDX0
    Related
    ENSBTAP00000061443.1, ENSBTAT00000076444.2
    Conserved Domains (6) summary
    smart00053
    Location:6 → 245
    DYNc; Dynamin, GTPase
    COG0699
    Location:79 → 744
    CrfC; Replication fork clamp-binding protein CrfC (dynamin-like GTPase family) [Replication, recombination and repair]
    cd01256
    Location:526 → 635
    PH_dynamin; Dynamin pleckstrin homology (PH) domain
    pfam01031
    Location:217 → 502
    Dynamin_M; Dynamin central region
    pfam02212
    Location:657 → 745
    GED; Dynamin GTPase effector domain
    pfam10630
    Location:767 → 838
    DUF2476; Protein of unknown function (DUF2476)

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037343.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    39259078..39910251
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059875294.1 → XP_059731277.1  dynamin-3 isoform X5

    UniProtKB/TrEMBL
    E1BA62
    Related
    ENSBTAP00000017776.7, ENSBTAT00000017776.7

  2. XM_059875295.1 → XP_059731278.1  dynamin-3 isoform X5

    UniProtKB/TrEMBL
    E1BA62

  3. XM_059875296.1 → XP_059731279.1  dynamin-3 isoform X6

  4. XM_005216884.5 → XP_005216941.1  dynamin-3 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MDX0, A0A3Q1MIC9
    Related
    ENSBTAP00000074058.1, ENSBTAT00000077619.2
    Conserved Domains (7) summary
    smart00053
    Location:6 → 245
    DYNc; Dynamin, GTPase
    COG0699
    Location:79 → 744
    CrfC; Replication fork clamp-binding protein CrfC (dynamin-like GTPase family) [Replication, recombination and repair]
    cd01256
    Location:526 → 635
    PH_dynamin; Dynamin pleckstrin homology (PH) domain
    pfam01031
    Location:217 → 502
    Dynamin_M; Dynamin central region
    pfam02212
    Location:657 → 745
    GED; Dynamin GTPase effector domain
    pfam10873
    Location:745 → 793
    DUF2668; Protein of unknown function (DUF2668)
    cl22974
    Location:771 → 831
    HpaP; Type III secretion protein (HpaP)

  5. XM_005216889.5 → XP_005216946.1  dynamin-3 isoform X3

    UniProtKB/TrEMBL
    A0A3Q1MDX0
    Conserved Domains (7) summary
    smart00053
    Location:6 → 245
    DYNc; Dynamin, GTPase
    COG0699
    Location:79 → 734
    CrfC; Replication fork clamp-binding protein CrfC (dynamin-like GTPase family) [Replication, recombination and repair]
    cd01256
    Location:514 → 625
    PH_dynamin; Dynamin pleckstrin homology (PH) domain
    pfam01031
    Location:217 → 502
    Dynamin_M; Dynamin central region
    pfam02212
    Location:647 → 735
    GED; Dynamin GTPase effector domain
    pfam10873
    Location:735 → 783
    DUF2668; Protein of unknown function (DUF2668)
    cl22974
    Location:761 → 821
    HpaP; Type III secretion protein (HpaP)

  6. XM_059875293.1 → XP_059731276.1  dynamin-3 isoform X4

  7. XM_024976120.2 → XP_024831888.1  dynamin-3 isoform X7

    UniProtKB/TrEMBL
    A0A3Q1MDX0, A0A3Q1NNP9
    Related
    ENSBTAP00000074527.2, ENSBTAT00000077041.2
    Conserved Domains (5) summary
    smart00053
    Location:6 → 245
    DYNc; Dynamin, GTPase
    cd01256
    Location:514 → 625
    PH_dynamin; Dynamin pleckstrin homology (PH) domain
    pfam01031
    Location:216 → 501
    Dynamin_M; Dynamin central region
    pfam02212
    Location:647 → 735
    GED; Dynamin GTPase effector domain
    pfam15822
    Location:743 → 833
    MISS; MAPK-interacting and spindle-stabilizing protein-like

  8. XM_059875292.1 → XP_059731275.1  dynamin-3 isoform X2

Nucleotide Protein Strain
Heading Accession and Version

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