U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

AFP alpha fetoprotein [ Bos taurus (cattle) ]

Gene ID: 506011, updated on 4-Jun-2024

Summary

Official Symbol
AFPprovided by VGNC
Official Full Name
alpha fetoproteinprovided by VGNC
Primary source
VGNC:VGNC:25717
See related
BGD:BT11055; Ensembl:ENSBTAG00000017131
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See AFP in Genome Data Viewer
Location:
chromosome: 6
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 6 NC_037333.1 (88511182..88532729)

Chromosome 6 - NC_037333.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 17 Neighboring gene albumin Neighboring gene alpha-fetoprotein-like Neighboring gene afamin Neighboring gene Ras association domain family member 6

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037333.1 Chromosome 6 Reference ARS-UCD2.0 Primary Assembly

General gene information

Clone Names

  • MGC128267

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in transport IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in blood microparticle IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
alpha-fetoprotein
Names
alpha-1-fetoprotein
alpha-fetoglobulin

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001034262.2NP_001029434.1  alpha-fetoprotein precursor

    See identical proteins and their annotated locations for NP_001029434.1

    Status: PROVISIONAL

    Source sequence(s)
    BC103123
    UniProtKB/Swiss-Prot
    Q3SZ57
    UniProtKB/TrEMBL
    A0A3Q1MIW0
    Related
    ENSBTAP00000022772.3, ENSBTAT00000022772.4
    Conserved Domains (2) summary
    smart00103
    Location:405595
    ALBUMIN; serum albumin
    pfam00273
    Location:222394
    Serum_albumin; Serum albumin family

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037333.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    88511182..88532729
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)