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Igbp1b immunoglobulin (CD79A) binding protein 1b [ Mus musculus (house mouse) ]

Gene ID: 50540, updated on 28-Oct-2024

Summary

Official Symbol
Igbp1bprovided by MGI
Official Full Name
immunoglobulin (CD79A) binding protein 1bprovided by MGI
Primary source
MGI:MGI:1354380
See related
Ensembl:ENSMUSG00000046717 AllianceGenome:MGI:1354380
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
alpha4-b
Summary
Predicted to enable protein phosphatase 2A binding activity. Predicted to be involved in regulation of dephosphorylation. Predicted to act upstream of or within signal transduction. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Is expressed in bladder; central nervous system; testis; ureter; and urethra of male. [provided by Alliance of Genome Resources, Oct 2024]
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Genomic context

See Igbp1b in Genome Data Viewer
Location:
6 G1; 6 69.23 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (138634087..138635452, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (138657089..138658454, complement)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene LIM domain only 3 Neighboring gene predicted gene, 30332 Neighboring gene RIKEN cDNA B230110G15 gene Neighboring gene protein inhibitor of activated STAT 2 pseudogene Neighboring gene predicted gene, 30583

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables phosphatase regulator activity TAS
Traceable Author Statement
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein phosphatase 2A binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in B cell activation IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of dephosphorylation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of signal transduction IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within signal transduction TAS
Traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
immunoglobulin-binding protein 1b
Names
CD79a-binding protein 1b

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_015777.3NP_056592.2  immunoglobulin-binding protein 1b

    See identical proteins and their annotated locations for NP_056592.2

    Status: VALIDATED

    Source sequence(s)
    AC139755
    Consensus CDS
    CCDS20670.1
    UniProtKB/Swiss-Prot
    Q9QZ29
    UniProtKB/TrEMBL
    A0A0B4J1F7
    Related
    ENSMUSP00000050818.5, ENSMUST00000054786.6
    Conserved Domains (1) summary
    pfam04177
    Location:13332
    TAP42; TAP42-like family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    138634087..138635452 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)