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CCT2 chaperonin containing TCP1 subunit 2 [ Bos taurus (domestic cattle) ]

Gene ID: 505313, updated on 5-Oct-2024

Summary

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Official Symbol
CCT2provided by VGNC
Official Full Name
chaperonin containing TCP1 subunit 2provided by VGNC
Primary source
VGNC:VGNC:26995
See related
BGD:BT15345; Ensembl:ENSBTAG00000019156
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See CCT2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (43869186..43884991, complement)

Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene bestrophin 3 Neighboring gene leucine rich repeat containing 10 Neighboring gene fibroblast growth factor receptor substrate 2 Neighboring gene microRNA mir-2427 Neighboring gene E3 ubiquitin-protein ligase MARCHF6-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. 4.0-A resolution cryo-EM structure of the mammalian chaperonin TRiC/CCT reveals its unique subunit arrangement. Cong Y, et al. Proc Natl Acad Sci U S A, 2010 Mar 16. PMID 20194787, Free PMC Article
  2. Crystal structure of the open conformation of the mammalian chaperonin CCT in complex with tubulin. Muñoz IG, et al. Nat Struct Mol Biol, 2011 Jan. PMID 21151115
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Clone Names

  • MGC128852

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chaperonin-containing T-complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
T-complex protein 1 subunit beta
Names
CCT-beta
TCP-1-beta
chaperonin containing TCP1, subunit 2 (beta)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001034239.1 → NP_001029411.1  T-complex protein 1 subunit beta

    See identical proteins and their annotated locations for NP_001029411.1

    Status: PROVISIONAL

    Source sequence(s)
    BC103298
    UniProtKB/Swiss-Prot
    Q3ZBH0
    UniProtKB/TrEMBL
    A0A3Q1LV18
    Related
    ENSBTAP00000025496.5, ENSBTAT00000025496.6
    Conserved Domains (1) summary
    cd03336
    Location:11 → 527
    TCP1_beta; TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL) ...

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    43869186..43884991 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q3ZBH0.3 GenPept UniProtKB/Swiss-Prot:Q3ZBH0

Gene LinkOut

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