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LARP7 La ribonucleoprotein 7, transcriptional regulator [ Bos taurus (domestic cattle) ]

Gene ID: 505053, updated on 4-Oct-2024

Summary

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Official Symbol
LARP7provided by VGNC
Official Full Name
La ribonucleoprotein 7, transcriptional regulatorprovided by VGNC
Primary source
VGNC:VGNC:30794
See related
BGD:BT16760; Ensembl:ENSBTAG00000009632
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See LARP7 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 6 NC_037333.1 (12971028..12988953, complement)

Chromosome 6 - NC_037333.1Genomic Context describing neighboring genes Neighboring gene ankyrin 2 Neighboring gene uncharacterized LOC112447035 Neighboring gene microRNA mir-302b Neighboring gene microRNA mir-302c Neighboring gene microRNA mir-302a Neighboring gene microRNA mir-302d Neighboring gene microRNA mir-367 Neighboring gene zinc finger GRF-type containing 1 Neighboring gene neurogenin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037333.1 Chromosome 6 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC151878

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
la-related protein 7
Names
La ribonucleoprotein domain family member 7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001075184.2 → NP_001068652.2  la-related protein 7

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000006
    UniProtKB/TrEMBL
    F1MR14
    Related
    ENSBTAP00000012693.6, ENSBTAT00000012693.7
    Conserved Domains (3) summary
    cd08032
    Location:28 → 109
    LARP_7; La RNA-binding domain of La-related protein 7
    cd12290
    Location:124 → 203
    RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
    pfam08777
    Location:455 → 542
    RRM_3; RNA binding motif

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037333.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    12971028..12988953 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024993097.2 → XP_024848865.1  la-related protein 7 isoform X4

    Conserved Domains (3) summary
    cd08032
    Location:28 → 109
    LARP_7; La RNA-binding domain of La-related protein 7
    cd12290
    Location:124 → 203
    RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
    cd12542
    Location:448 → 529
    RRM2_LARP7; RNA recognition motif 2 in La-related protein 7 (LARP7) and similar proteins

  2. XM_005207598.5 → XP_005207655.1  la-related protein 7 isoform X3

    Conserved Domains (3) summary
    cd08032
    Location:28 → 109
    LARP_7; La RNA-binding domain of La-related protein 7
    cd12290
    Location:124 → 203
    RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
    cd12542
    Location:449 → 530
    RRM2_LARP7; RNA recognition motif 2 in La-related protein 7 (LARP7) and similar proteins

  3. XM_010805888.3 → XP_010804190.1  la-related protein 7 isoform X2

    See identical proteins and their annotated locations for XP_010804190.1

    Conserved Domains (3) summary
    cd08032
    Location:28 → 109
    LARP_7; La RNA-binding domain of La-related protein 7
    cd12290
    Location:124 → 203
    RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
    cd12542
    Location:449 → 530
    RRM2_LARP7; RNA recognition motif 2 in La-related protein 7 (LARP7) and similar proteins

  4. XM_010805887.4 → XP_010804189.1  la-related protein 7 isoform X1

    See identical proteins and their annotated locations for XP_010804189.1

    UniProtKB/TrEMBL
    A0A3Q1LP50
    Conserved Domains (3) summary
    cd08032
    Location:28 → 109
    LARP_7; La RNA-binding domain of La-related protein 7
    cd12290
    Location:124 → 203
    RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
    cd12542
    Location:450 → 531
    RRM2_LARP7; RNA recognition motif 2 in La-related protein 7 (LARP7) and similar proteins

  5. XM_015471493.3 → XP_015326979.1  la-related protein 7 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1LP50
    Conserved Domains (3) summary
    cd08032
    Location:28 → 109
    LARP_7; La RNA-binding domain of La-related protein 7
    cd12290
    Location:124 → 203
    RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
    cd12542
    Location:450 → 531
    RRM2_LARP7; RNA recognition motif 2 in La-related protein 7 (LARP7) and similar proteins

  6. XM_005207596.5 → XP_005207653.1  la-related protein 7 isoform X1

    See identical proteins and their annotated locations for XP_005207653.1

    UniProtKB/TrEMBL
    A0A3Q1LP50
    Related
    ENSBTAP00000061840.2, ENSBTAT00000084701.2
    Conserved Domains (3) summary
    cd08032
    Location:28 → 109
    LARP_7; La RNA-binding domain of La-related protein 7
    cd12290
    Location:124 → 203
    RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
    cd12542
    Location:450 → 531
    RRM2_LARP7; RNA recognition motif 2 in La-related protein 7 (LARP7) and similar proteins

  7. XM_059887413.1 → XP_059743396.1  la-related protein 7 isoform X5

Nucleotide Protein Strain
Heading Accession and Version

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