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Nox4 NADPH oxidase 4 [ Mus musculus (house mouse) ]

Gene ID: 50490, updated on 2-Nov-2024

Summary

Official Symbol
Nox4provided by MGI
Official Full Name
NADPH oxidase 4provided by MGI
Primary source
MGI:MGI:1354184
See related
Ensembl:ENSMUSG00000030562 AllianceGenome:MGI:1354184
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Enables protein tyrosine kinase binding activity and superoxide-generating NAD(P)H oxidase activity. Involved in several processes, including positive regulation of intracellular signal transduction; positive regulation of macromolecule metabolic process; and superoxide anion generation. Acts upstream of or within bone resorption and cardiac muscle cell differentiation. Located in cell periphery; mitochondrion; and perinuclear region of cytoplasm. Is expressed in embryo; heart; metanephros; renal cortex; and ventricle compact myocardium. Orthologous to human NOX4 (NADPH oxidase 4). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in kidney adult (RPKM 51.3) and lung adult (RPKM 5.1) See more
Orthologs
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Genomic context

See Nox4 in Genome Data Viewer
Location:
7 D3; 7 48.96 cM
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (86893638..87047918)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (87244430..87398710)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_19469 Neighboring gene vomeronasal 2, receptor 79 Neighboring gene STARR-seq mESC enhancer starr_19470 Neighboring gene STARR-seq mESC enhancer starr_19471 Neighboring gene ribosomal protein S4, X-linked pseudogene Neighboring gene STARR-seq mESC enhancer starr_19472 Neighboring gene tyrosinase Neighboring gene STARR-seq mESC enhancer starr_19473 Neighboring gene tyrosinase locus control region Neighboring gene predicted gene, 57515

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables NAD(P)H oxidase H2O2-forming activity ISO
Inferred from Sequence Orthology
more info
 
enables NAD(P)H oxidase H2O2-forming activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables NADPH oxidase H202-forming activity IEA
Inferred from Electronic Annotation
more info
 
enables heme binding ISO
Inferred from Sequence Orthology
more info
 
enables heme binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables modified amino acid binding IEA
Inferred from Electronic Annotation
more info
 
enables modified amino acid binding ISO
Inferred from Sequence Orthology
more info
 
enables oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor ISO
Inferred from Sequence Orthology
more info
 
enables protein tyrosine kinase binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables superoxide-generating NAD(P)H oxidase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables superoxide-generating NAD(P)H oxidase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables superoxide-generating NAD(P)H oxidase activity ISO
Inferred from Sequence Orthology
more info
 
enables superoxide-generating NADPH oxidase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within bone resorption IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within cardiac muscle cell differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in cell morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in cellular response to glucose stimulus IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in defense response IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in gene expression IEA
Inferred from Electronic Annotation
more info
 
involved_in gene expression ISO
Inferred from Sequence Orthology
more info
 
involved_in heart process IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in heart process ISO
Inferred from Sequence Orthology
more info
 
involved_in homocysteine metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in homocysteine metabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of cell population proliferation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of DNA biosynthetic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of ERK1 and ERK2 cascade IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of MAP kinase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of apoptotic process ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of hydrogen peroxide biosynthetic process ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of protein tyrosine kinase activity IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of reactive oxygen species metabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of smooth muscle cell migration ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of stress fiber assembly ISO
Inferred from Sequence Orthology
more info
 
involved_in reactive oxygen species metabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in superoxide anion generation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in superoxide anion generation IDA
Inferred from Direct Assay
more info
PubMed 
involved_in superoxide metabolic process ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
part_of NADPH oxidase complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of NADPH oxidase complex ISO
Inferred from Sequence Orthology
more info
 
located_in apical plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in cell periphery IDA
Inferred from Direct Assay
more info
PubMed 
located_in endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
 
located_in endoplasmic reticulum ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 
located_in endoplasmic reticulum membrane ISO
Inferred from Sequence Orthology
more info
 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 
located_in focal adhesion ISO
Inferred from Sequence Orthology
more info
 
located_in mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 
located_in nucleolus ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
located_in perinuclear endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
 
located_in perinuclear region of cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in perinuclear region of cytoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in sarcoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
 
located_in stress fiber ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
NADPH oxidase 4
Names
KOX-1
kidney oxidase-1
kidney superoxide-producing NADPH oxidase
renal NAD(P)H-oxidase
superoxide-generating NADPH oxidase 4
NP_001272762.1
NP_001272764.1
NP_056575.1
XP_006508073.1
XP_006508074.1
XP_006508075.1
XP_017177836.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001285833.1NP_001272762.1  NADPH oxidase 4 isoform 2

    See identical proteins and their annotated locations for NP_001272762.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate splice junction at the 5' end of an exon and contains two additional alternate coding exons compared to variant 1. These differences cause translation initiation at a downstream AUG and result in an isoform (2) with a shorter N-terminus and an alternate internal segment compared to isoform 1.
    Source sequence(s)
    AC141329, AK149398, AK149455, BY001994, CJ227847
    Conserved Domains (2) summary
    cd06186
    Location:237542
    NOX_Duox_like_FAD_NADP; NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as superoxide and hydrogen peroxide. ROS were originally identified as bactericidal agents in phagocytes, but are now also implicated in cell signaling and metabolism. NOX ...
    pfam01794
    Location:17130
    Ferric_reduct; Ferric reductase like transmembrane component
  2. NM_001285835.1NP_001272764.1  NADPH oxidase 4 isoform 3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) uses an alternate splice junction at the 5' end of an exon compared to variant 1. This difference causes translation initiation at a downstream AUG and results in an isoform (3) with a shorter N-terminus compared to isoform 1.
    Source sequence(s)
    AK149398, AK149455, BY001994, CJ227847
    Conserved Domains (2) summary
    cd06186
    Location:237503
    NOX_Duox_like_FAD_NADP; NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as superoxide and hydrogen peroxide. ROS were originally identified as bactericidal agents in phagocytes, but are now also implicated in cell signaling and metabolism. NOX ...
    pfam01794
    Location:17130
    Ferric_reduct; Ferric reductase like transmembrane component
  3. NM_015760.5NP_056575.1  NADPH oxidase 4 isoform 1

    See identical proteins and their annotated locations for NP_056575.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes the longest isoform (1).
    Source sequence(s)
    AK050371, AK149398, AK149455, BY001994, CJ227847
    Consensus CDS
    CCDS21437.1
    UniProtKB/Swiss-Prot
    Q3TF39, Q8C3M1, Q8VCA3, Q9JHI8
    UniProtKB/TrEMBL
    B2RSM1
    Related
    ENSMUSP00000032781.8, ENSMUST00000032781.14
    Conserved Domains (2) summary
    cd06186
    Location:311577
    NOX_Duox_like_FAD_NADP; NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as superoxide and hydrogen peroxide. ROS were originally identified as bactericidal agents in phagocytes, but are now also implicated in cell signaling and metabolism. NOX ...
    pfam01794
    Location:69204
    Ferric_reduct; Ferric reductase like transmembrane component

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    86893638..87047918
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006508012.2XP_006508075.1  NADPH oxidase 4 isoform X4

    UniProtKB/Swiss-Prot
    Q9JHI8
    Conserved Domains (2) summary
    cd06186
    Location:311616
    NOX_Duox_like_FAD_NADP; NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as superoxide and hydrogen peroxide. ROS were originally identified as bactericidal agents in phagocytes, but are now also implicated in cell signaling and metabolism. NOX ...
    pfam01794
    Location:69204
    Ferric_reduct; Ferric reductase like transmembrane component
  2. XM_017322347.2XP_017177836.1  NADPH oxidase 4 isoform X1

    Conserved Domains (2) summary
    cd06186
    Location:311576
    NOX_Duox_like_FAD_NADP; NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as superoxide and hydrogen peroxide. ROS were originally identified as bactericidal agents in phagocytes, but are now also implicated in cell signaling and metabolism. NOX ...
    pfam01794
    Location:69204
    Ferric_reduct; Ferric reductase like transmembrane component
  3. XM_006508011.4XP_006508074.1  NADPH oxidase 4 isoform X3

    Conserved Domains (2) summary
    pfam01794
    Location:69204
    Ferric_reduct; Ferric reductase like transmembrane component
    cl06868
    Location:307357
    FNR_like; Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport ...
  4. XM_006508010.4XP_006508073.1  NADPH oxidase 4 isoform X2

    Conserved Domains (2) summary
    cd06186
    Location:294560
    NOX_Duox_like_FAD_NADP; NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as superoxide and hydrogen peroxide. ROS were originally identified as bactericidal agents in phagocytes, but are now also implicated in cell signaling and metabolism. NOX ...
    pfam01794
    Location:52187
    Ferric_reduct; Ferric reductase like transmembrane component

RNA

  1. XR_004934139.1 RNA Sequence