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BEND6 BEN domain containing 6 [ Bos taurus (domestic cattle) ]

Gene ID: 504789, updated on 4-Oct-2024

Summary

Official Symbol
BEND6provided by VGNC
Official Full Name
BEN domain containing 6provided by VGNC
Primary source
VGNC:VGNC:26469
See related
BGD:BT21941; Ensembl:ENSBTAG00000008228
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See BEND6 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 23 NC_037350.1 (3189359..3252721, complement)

Chromosome 23 - NC_037350.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 451 Neighboring gene uncharacterized LOC104975635 Neighboring gene large ribosomal subunit protein eL34-like Neighboring gene small nucleolar RNA SNORA18 Neighboring gene microRNA mir-2285j-2 Neighboring gene microRNA mir-2375 Neighboring gene dystonin

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037350.1 Chromosome 23 Reference ARS-UCD2.0 Primary Assembly

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in negative regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in positive regulation of neuron differentiation IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
BEN domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001205554.1NP_001192483.1  BEN domain-containing protein 6

    See identical proteins and their annotated locations for NP_001192483.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000023
    UniProtKB/TrEMBL
    E1BI44
    Related
    ENSBTAP00000010825.4, ENSBTAT00000010825.5
    Conserved Domains (1) summary
    smart01025
    Location:190271
    BEN; The BEN domain is found in diverse animal proteins

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037350.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    3189359..3252721 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024983426.2XP_024839194.1  BEN domain-containing protein 6 isoform X1