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CAP1 cyclase associated actin cytoskeleton regulatory protein 1 [ Bos taurus (domestic cattle) ]

Gene ID: 504519, updated on 12-Oct-2024

Summary

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Official Symbol
CAP1provided by VGNC
Official Full Name
cyclase associated actin cytoskeleton regulatory protein 1provided by VGNC
Primary source
VGNC:VGNC:26737
See related
BGD:BT24709; Ensembl:ENSBTAG00000013363
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See CAP1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (106037110..106065747, complement)

Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene RLF zinc finger Neighboring gene uncharacterized LOC132344934 Neighboring gene small nucleolar RNA SNORA79 Neighboring gene palmitoyl-protein thioesterase 1 Neighboring gene transfer RNA arginine (anticodon CCU) Neighboring gene uncharacterized LOC132344935 Neighboring gene MFSD2 lysolipid transporter A, lysophospholipid

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bovine herpesvirus 1 productive infection stimulates inflammasome formation and caspase 1 activity. Wang J, et al. Virus Res, 2014 Jun 24. PMID 24657787, Free PMC Article
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Bovine herpesvirus 1 infection stimulates caspase 1 activity.
    Title: Bovine herpesvirus 1 productive infection stimulates inflammasome formation and caspase 1 activity.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Markers

Homology

Clone Names

  • MGC127425

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables adenylate cyclase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cAMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of adenylate cyclase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
adenylyl cyclase-associated protein 1
Names
CAP 1
CAP, adenylate cyclase-associated protein 1
adenylate cyclase associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001035010.2 → NP_001030182.1  adenylyl cyclase-associated protein 1

    See identical proteins and their annotated locations for NP_001030182.1

    Status: PROVISIONAL

    Source sequence(s)
    BC103366
    UniProtKB/Swiss-Prot
    Q3SYV4
    Conserved Domains (2) summary
    pfam01213
    Location:7 → 291
    CAP_N; Adenylate cyclase associated (CAP) N terminal
    pfam08603
    Location:321 → 470
    CAP_C; Adenylate cyclase associated (CAP) C terminal

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    106037110..106065747 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005204657.3 → XP_005204714.1  adenylyl cyclase-associated protein 1 isoform X2

    See identical proteins and their annotated locations for XP_005204714.1

    UniProtKB/TrEMBL
    A6QLB7
    Conserved Domains (2) summary
    pfam01213
    Location:7 → 290
    CAP_N; Adenylate cyclase associated (CAP) N terminal
    pfam08603
    Location:320 → 469
    CAP_C; Adenylate cyclase associated (CAP) C terminal

  2. XM_005204654.5 → XP_005204711.1  adenylyl cyclase-associated protein 1 isoform X1

    See identical proteins and their annotated locations for XP_005204711.1

    UniProtKB/Swiss-Prot
    Q3SYV4
    Conserved Domains (2) summary
    pfam01213
    Location:7 → 291
    CAP_N; Adenylate cyclase associated (CAP) N terminal
    pfam08603
    Location:321 → 470
    CAP_C; Adenylate cyclase associated (CAP) C terminal

  3. XM_005204659.5 → XP_005204716.1  adenylyl cyclase-associated protein 1 isoform X2

    See identical proteins and their annotated locations for XP_005204716.1

    UniProtKB/TrEMBL
    A6QLB7
    Conserved Domains (2) summary
    pfam01213
    Location:7 → 290
    CAP_N; Adenylate cyclase associated (CAP) N terminal
    pfam08603
    Location:320 → 469
    CAP_C; Adenylate cyclase associated (CAP) C terminal

  4. XM_059882306.1 → XP_059738289.1  adenylyl cyclase-associated protein 1 isoform X1

    UniProtKB/Swiss-Prot
    Q3SYV4

  5. XM_005204656.3 → XP_005204713.1  adenylyl cyclase-associated protein 1 isoform X2

    See identical proteins and their annotated locations for XP_005204713.1

    UniProtKB/TrEMBL
    A6QLB7
    Related
    ENSBTAP00000017775.5, ENSBTAT00000017775.6
    Conserved Domains (2) summary
    pfam01213
    Location:7 → 290
    CAP_N; Adenylate cyclase associated (CAP) N terminal
    pfam08603
    Location:320 → 469
    CAP_C; Adenylate cyclase associated (CAP) C terminal

  6. XM_005204655.5 → XP_005204712.1  adenylyl cyclase-associated protein 1 isoform X1

    See identical proteins and their annotated locations for XP_005204712.1

    UniProtKB/Swiss-Prot
    Q3SYV4
    Conserved Domains (2) summary
    pfam01213
    Location:7 → 291
    CAP_N; Adenylate cyclase associated (CAP) N terminal
    pfam08603
    Location:321 → 470
    CAP_C; Adenylate cyclase associated (CAP) C terminal
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q3SYV4.3 GenPept UniProtKB/Swiss-Prot:Q3SYV4

Gene LinkOut

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