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ELF4 E74 like ETS transcription factor 4 [ Bos taurus (domestic cattle) ]

Gene ID: 504514, updated on 4-Oct-2024

Summary

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Official Symbol
ELF4provided by VGNC
Official Full Name
E74 like ETS transcription factor 4provided by VGNC
Primary source
VGNC:VGNC:28429
See related
BGD:BT25194; Ensembl:ENSBTAG00000019061
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See ELF4 in Genome Data Viewer
Location:
chromosome: X
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) X NC_037357.1 (14041704..14081547, complement)

Chromosome X - NC_037357.1Genomic Context describing neighboring genes Neighboring gene UTP14A small subunit processome component Neighboring gene BCL6 corepressor like 1 Neighboring gene apoptosis inducing factor mitochondria associated 1 Neighboring gene RAB33A, member RAS oncogene family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037357.1 Chromosome X Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ETS-related transcription factor Elf-4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001192029.1 → NP_001178958.1  ETS-related transcription factor Elf-4

    See identical proteins and their annotated locations for NP_001178958.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000030
    UniProtKB/TrEMBL
    E1BA84
    Related
    ENSBTAP00000025376.4, ENSBTAT00000025376.6
    Conserved Domains (2) summary
    pfam00178
    Location:210 → 289
    Ets; Ets-domain
    pfam12310
    Location:2 → 103
    Elf-1_N; Transcription factor protein N terminal

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037357.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    14041704..14081547 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005227486.5 → XP_005227543.1  ETS-related transcription factor Elf-4 isoform X1

    See identical proteins and their annotated locations for XP_005227543.1

    UniProtKB/TrEMBL
    E1BA84
    Conserved Domains (2) summary
    pfam00178
    Location:210 → 289
    Ets; Ets-domain
    pfam12310
    Location:2 → 103
    Elf-1_N; Transcription factor protein N terminal

  2. XM_005227487.5 → XP_005227544.1  ETS-related transcription factor Elf-4 isoform X1

    See identical proteins and their annotated locations for XP_005227544.1

    UniProtKB/TrEMBL
    E1BA84
    Conserved Domains (2) summary
    pfam00178
    Location:210 → 289
    Ets; Ets-domain
    pfam12310
    Location:2 → 103
    Elf-1_N; Transcription factor protein N terminal
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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