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ACOT8 acyl-CoA thioesterase 8 [ Bos taurus (domestic cattle) ]

Gene ID: 504360, updated on 4-Oct-2024

Summary

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Official Symbol
ACOT8provided by VGNC
Official Full Name
acyl-CoA thioesterase 8provided by VGNC
Primary source
VGNC:VGNC:25550
See related
BGD:BT18904; Ensembl:ENSBTAG00000020371
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See ACOT8 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 13 NC_037340.1 (74608956..74620937, complement)

Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene ubiquitin conjugating enzyme E2 C Neighboring gene troponin C2, fast skeletal type Neighboring gene sorting nexin family member 21 Neighboring gene zinc finger SWIM-type containing 3 Neighboring gene zinc finger SWIM-type containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037340.1 Chromosome 13 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC140184

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acyl-CoA hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisomal matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acyl-coenzyme A thioesterase 8
NP_001068625.2
XP_005214576.1
XP_005214577.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001075157.2 → NP_001068625.2  acyl-coenzyme A thioesterase 8

    See identical proteins and their annotated locations for NP_001068625.2

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000013
    Conserved Domains (3) summary
    cd03444
    Location:203 → 306
    Thioesterase_II_repeat1; Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) ...
    cd03445
    Location:37 → 128
    Thioesterase_II_repeat2; Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) ...
    TIGR00189
    Location:32 → 307
    tesB; acyl-CoA thioesterase II

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037340.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    74608956..74620937 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005214520.4 → XP_005214577.1  acyl-coenzyme A thioesterase 8 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1N6L4
    Related
    ENSBTAP00000066160.1, ENSBTAT00000074004.2
    Conserved Domains (3) summary
    cd03444
    Location:203 → 326
    Thioesterase_II_repeat1; Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) ...
    cd03445
    Location:37 → 128
    Thioesterase_II_repeat2; Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) ...
    TIGR00189
    Location:32 → 327
    tesB; acyl-CoA thioesterase II

  2. XM_005214519.5 → XP_005214576.1  acyl-coenzyme A thioesterase 8 isoform X1

    UniProtKB/TrEMBL
    F6RWU6
    Related
    ENSBTAP00000027152.6, ENSBTAT00000027152.7
    Conserved Domains (3) summary
    cd03444
    Location:203 → 279
    Thioesterase_II_repeat1; Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) ...
    cd03445
    Location:37 → 128
    Thioesterase_II_repeat2; Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) ...
    pfam02551
    Location:34 → 120
    Acyl_CoA_thio; Acyl-CoA thioesterase
Nucleotide Protein Strain
Heading Accession and Version

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