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Ccer1 coiled-coil glutamate-rich protein 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 500825, updated on 17-Aug-2024

Summary

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Official Symbol
Ccer1provided by RGD
Official Full Name
coiled-coil glutamate-rich protein 1provided by RGD
Primary source
RGD:1560042
See related
EnsemblRapid:ENSRNOG00000004875 AllianceGenome:RGD:1560042
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Orthologous to human CCER1 (coiled-coil glutamate rich protein 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
human mouse all
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Genomic context

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See Ccer1 in Genome Data Viewer
Location:
7q13
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (34371735..34413638)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (32485063..32521296)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (38945637..38965940)

Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene keratocan Neighboring gene epiphycan Neighboring gene small nucleolar RNA SNORA17 Neighboring gene uncharacterized LOC120093567

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
coiled-coil domain-containing glutamate-rich protein 1
Names
uncharacterized protein C12orf12 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001025052.1 → NP_001020223.1  coiled-coil domain-containing glutamate-rich protein 1

    See identical proteins and their annotated locations for NP_001020223.1

    Status: PROVISIONAL

    Source sequence(s)
    BC079199
    UniProtKB/Swiss-Prot
    Q6AY45
    UniProtKB/TrEMBL
    A6IG70
    Conserved Domains (1) summary
    pfam15482
    Location:4 → 218
    CCER1; Coiled-coil domain-containing glutamate-rich protein family 1

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086025.1 Reference GRCr8

    Range
    34371735..34413638
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039079740.2 → XP_038935668.1  coiled-coil domain-containing glutamate-rich protein 1 isoform X1

    UniProtKB/Swiss-Prot
    Q6AY45
    UniProtKB/TrEMBL
    A6IG70
    Related
    ENSRNOP00000006455.3, ENSRNOT00000006455.5
    Conserved Domains (1) summary
    pfam15482
    Location:4 → 218
    CCER1; Coiled-coil domain-containing glutamate-rich protein family 1

  2. XM_039079739.2 → XP_038935667.1  coiled-coil domain-containing glutamate-rich protein 1 isoform X1

    UniProtKB/Swiss-Prot
    Q6AY45
    UniProtKB/TrEMBL
    A6IG70
    Conserved Domains (1) summary
    pfam15482
    Location:4 → 218
    CCER1; Coiled-coil domain-containing glutamate-rich protein family 1

  3. XM_063264099.1 → XP_063120169.1  coiled-coil domain-containing glutamate-rich protein 1 isoform X2

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6AY45.1 GenPept UniProtKB/Swiss-Prot:Q6AY45

Gene LinkOut

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