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Pgk1l1 phosphoglycerate kinase 1 like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 499525, updated on 2-Nov-2024

Summary

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Official Symbol
Pgk1l1provided by RGD
Official Full Name
phosphoglycerate kinase 1 like 1provided by RGD
Primary source
RGD:1560402
See related
EnsemblRapid:ENSRNOG00000026928 AllianceGenome:RGD:1560402
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1560402
Summary
Predicted to enable ATP binding activity and phosphoglycerate kinase activity. Predicted to be involved in glycolytic process and phosphorylation. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in hemolytic anemia and phosphoglycerate kinase 1 deficiency. Orthologous to human PGK1 (phosphoglycerate kinase 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Pgk1l1 in Genome Data Viewer
Location:
2q14
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (44487980..44489330)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (42754605..42755929)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (42726747..42728100)

Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134485834 Neighboring gene uncharacterized LOC103691451 Neighboring gene actin, beta-like 2 Neighboring gene GC-rich promoter binding protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables phosphoglycerate kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
  
involved_in phosphorylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
phosphoglycerate kinase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086020.1 Reference GRCr8

    Range
    44487980..44489330
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039103506.2 → XP_038959434.1  phosphoglycerate kinase 1-like

    UniProtKB/TrEMBL
    A0A096MJL6, M0R6Y8
    Related
    ENSRNOT00000036860.4
    Conserved Domains (1) summary
    cl00198
    Location:3 → 404
    Phosphoglycerate_kinase; Phosphoglycerate kinase (PGK) is a monomeric enzyme which catalyzes the transfer of the high-energy phosphate group of 1,3-bisphosphoglycerate to ADP, forming ATP and 3-phosphoglycerate. This reaction represents the first of the two substrate-level ...
Nucleotide Protein Strain
Heading Accession and Version

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