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An04g09700 uncharacterized protein [ Aspergillus niger ]

Gene ID: 4991373, updated on 31-Oct-2024

Summary

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Gene symbol
An04g09700
Gene description
uncharacterized protein
Locus tag
An04g09700
See related
FungiDB:An04g09700; VEuPathDB:An04g09700
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus niger
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
Orthologs
Aspergillus fumigatus all
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Genomic context

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See An04g09700 in Genome Data Viewer
Location:
chromosome: VI, map: unlocalized, clone: An04
Exon count:
2

NT_166539.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NT_166539.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88. Pel HJ, et al. Nat Biotechnol, 2007 Feb. PMID 17259976
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_001402326.1
  • Function: A. tubingensis xghA is involved in carbohydrate utilisation and specifically degrades a xylose-substituted galacturonic acid backbone.;
    Title: strong similarity to endo-xylogalacturonan hydrolase xghA - Aspergillus tubingensis;
    See PMID 10618200

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_166539.1 Reference assembly

    Range
    2362985..2364268
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001402289.1 → XP_001402326.1  uncharacterized protein An04g09700 [Aspergillus niger]

    See identical proteins and their annotated locations for XP_001402326.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    A2QK83, Q27UA4
    UniProtKB/TrEMBL
    A0A254TVL7, A0A319AE32, A0A370BIT1, G3YAL1
    Conserved Domains (1) summary
    cl26318
    Location:90 → 394
    Glyco_hydro_28; Glycosyl hydrolases family 28
Nucleotide Protein
Heading Accession and Version

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