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An17g01580 uncharacterized protein [ Aspergillus niger ]

Gene ID: 4989481, updated on 31-Oct-2024

Summary

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Gene symbol
An17g01580
Gene description
uncharacterized protein
Locus tag
An17g01580
See related
FungiDB:An17g01580; VEuPathDB:An17g01580
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus niger
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
Orthologs
Aspergillus fumigatus all
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Genomic context

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See An17g01580 in Genome Data Viewer
Location:
chromosome: V, map: unlocalized, clone: An17
Exon count:
5

NT_166532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NT_166532.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88. Pel HJ, et al. Nat Biotechnol, 2007 Feb. PMID 17259976
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sexual reproduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Ste12p-Dig1p-Dig2p complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Tec1p-Ste12p-Dig1p complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_001398387.1
  • Remark: S. cerevisiae Ste12p plays a key role in coupling signal transduction through MAP kinase modules to cell-specific or morphogenesis-specific gene expression required for mating and pseudohyphal (PH)/filamentous growth (FG). Ste12p homologues in the pathogenic yeasts Candida albicans and Filobasidiela neoformans apparently play similar roles during dimorphic transitions.;
    Title: strong similarity to homeodomain DNA-binding transcription factor ste12 - Aspergillus nidulans;
    See PMID 10792717

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_166532.1 Reference assembly

    Range
    375006..377466 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001398350.3 → XP_001398387.1  uncharacterized protein An17g01580 [Aspergillus niger]

    See identical proteins and their annotated locations for XP_001398387.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A370BYA7, A0A505IQ28, A2R9I8, G3Y4M8
    Conserved Domains (4) summary
    COG5048
    Location:566 → 624
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:574 → 596
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam02200
    Location:57 → 165
    STE; STE like transcription factor
    pfam13465
    Location:588 → 613
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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