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Tex29 testis expressed 29 [ Rattus norvegicus (Norway rat) ]

Gene ID: 498664, updated on 4-Jan-2025

Summary

Official Symbol
Tex29provided by RGD
Official Full Name
testis expressed 29provided by RGD
Primary source
RGD:1565377
See related
EnsemblRapid:ENSRNOG00000033585 AllianceGenome:RGD:1565377
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to be located in membrane. Orthologous to human TEX29 (testis expressed 29). [provided by Alliance of Genome Resources, Jan 2025]
Expression
Biased expression in Testes (RPKM 7.0), Spleen (RPKM 3.3) and 9 other tissues See more
Orthologs
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Genomic context

See Tex29 in Genome Data Viewer
Location:
16q12.5
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 16 NC_086034.1 (84352574..84366273, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 16 NC_051351.1 (77650471..77664171, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 16 NC_005115.4 (82985834..83000928, complement)

Chromosome 16 - NC_086034.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120097565 Neighboring gene uncharacterized LOC102553495 Neighboring gene SRY-box transcription factor 1 Neighboring gene uncharacterized LOC134482535 Neighboring gene Rho guanine nucleotide exchange factor 7 Neighboring gene uncharacterized LOC134482534

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
testis-expressed protein 29
Names
testis-expressed sequence 29 protein
uncharacterized protein C13orf16 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001017508.3NP_001017508.1  testis-expressed protein 29

    See identical proteins and their annotated locations for NP_001017508.1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000016
    UniProtKB/Swiss-Prot
    Q6AXY3
    Conserved Domains (1) summary
    pfam15839
    Location:2088
    TEX29; Testis-expressed sequence 29 protein
  2. NM_001415041.1NP_001401970.1  testis-expressed protein 29

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000016
    UniProtKB/Swiss-Prot
    Q6AXY3
    Related
    ENSRNOP00000042289.2, ENSRNOT00000041223.4

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086034.1 Reference GRCr8

    Range
    84352574..84366273 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)