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cbhA 1,4-beta-D-glucan cellobiohydrolase A precursor cbhA-Aspergillus niger [ Aspergillus niger ]

Gene ID: 4982202, updated on 31-Oct-2024

Summary

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Gene symbol
cbhA
Gene description
1,4-beta-D-glucan cellobiohydrolase A precursor cbhA-Aspergillus niger
Locus tag
An07g09330
See related
FungiDB:An07g09330; VEuPathDB:An07g09330
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus niger
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
Orthologs
Aspergillus fumigatus all
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Genomic context

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See cbhA in Genome Data Viewer
Location:
chromosome: IV, map: unlocalized, clone: An07
Exon count:
4

NT_166523.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NT_166523.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88. Pel HJ, et al. Nat Biotechnol, 2007 Feb. PMID 17259976
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1,4-beta-D-glucan cellobiohydrolase A precursor cbhA-Aspergillus niger
XP_001392008.3
  • Catalytic activity: hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose and cellotetraose, releasing cellobiose from the non-reducing ends of the chains.;
    Gene-ID: cbhA;
    Induction: transcription of cbhA of A. niger is induced by D-xylose but not by sophorose and, in addition,requires the xylanolytic transcriptional activator XlnR.;
    Mapping: cbhA from A. niger is mapped to chromosome IV; see list from DSM, EMBL AF156268.;
    Pathway: cbhA of A. niger is involved in starch and sucrose metabolism.;
    Remark: the ORF is nearly identical to patent cbhB WO9906574-A1 in PATENTPROT:AAY00864, but differs in amino acids A86T, V170A and E359D.;
    Remark: the ORF overlaps with the sequence in EMBL:E32834, with sequence 5 from patent EP0897667 in EMBL:AX000304, with sequence 5 from patent WO9906574 in EMBL:AX000154, with cbhA of A. niger in EMBL:AF156268,with cbhA of A. niger in PATENTDNA:AAX21510, and with cbhA of A. niger in PATENTDNA:AAX22094.;
    See PMID 10508057

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_166523.1 Reference assembly

    Range
    2095750..2097264
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001391971.3 → XP_001392008.3  1,4-beta-D-glucan cellobiohydrolase A precursor cbhA-Aspergillus niger [Aspergillus niger]

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    A2QPG2
    UniProtKB/TrEMBL
    A0A319A149, A0A370BIK6, A0A9W6E9B3
Nucleotide Protein
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