U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

An07g03140 uncharacterized protein [ Aspergillus niger ]

Gene ID: 4981581, updated on 31-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
An07g03140
Gene description
uncharacterized protein
Locus tag
An07g03140
See related
FungiDB:An07g03140; VEuPathDB:An07g03140
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus niger
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
Orthologs
Aspergillus fumigatus all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See An07g03140 in Genome Data Viewer
Location:
chromosome: IV, map: unlocalized, clone: An07
Exon count:
2

NT_166523.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NT_166523.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88. Pel HJ, et al. Nat Biotechnol, 2007 Feb. PMID 17259976
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-xylulokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-xylose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xylulose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein
XP_001391397.1
  • Catalytic activity: XKS1 of S. cerevisiae converts ATP + D-xylulose <=> ADP + D-xylulose 5-phosphate.;
    Function: XKS1 of S. cerevisiae is necessary for growth in culture media with D-xylulose as the sole carbon source, which can induce the production of ethanol.;
    Phenotype: overexpression of XKS1 from S. cerevisiae negatively influenced cell growth in xylulose.;
    Title: strong similarity to D-xylulokinase Xks1 -Saccharomyces cerevisiae;
    See PMID 9595677;
    See PMID 10981687;
    See PMID 11461146

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_166523.1 Reference assembly

    Range
    660494..662273
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001391360.3 → XP_001391397.1  uncharacterized protein An07g03140 [Aspergillus niger]

    See identical proteins and their annotated locations for XP_001391397.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    A2QMS4, Q8X167
    UniProtKB/TrEMBL
    A0A370BSY4, A0A3F3RF91, G3Y0G2
    Conserved Domains (1) summary
    cd07776
    Location:5 → 510
    FGGY_D-XK_euk; eukaryotic D-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials