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dpm1 dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 496884, updated on 4-Nov-2024

Summary

Official Symbol
dpm1provided by Xenbase
Official Full Name
dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunitprovided by Xenbase
Primary source
Xenbase:XB-GENE-976623
See related
Ensembl:ENSXETG00000012303 AllianceGenome:Xenbase:XB-GENE-976623
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Summary
Predicted to enable dolichyl-phosphate beta-D-mannosyltransferase activity. Predicted to act upstream of or within protein glycosylation. Predicted to be located in endoplasmic reticulum. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Ie. Orthologous to human DPM1 (dolichyl-phosphate mannosyltransferase subunit 1, catalytic). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See dpm1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
9
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 10 NC_030686.2 (35634170..35646731)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 10 NC_030686.1 (27415037..27427931)

Chromosome 10 - NC_030686.2Genomic Context describing neighboring genes Neighboring gene nuclear factor of activated T cells 2 Neighboring gene potassium channel, voltage gated modifier subfamily G, member 1 Neighboring gene activity-dependent neuroprotector homeobox Neighboring gene breast carcinoma amplified sequence 4

Genomic regions, transcripts, and products

General protein information

Preferred Names
dolichol-phosphate mannosyltransferase subunit 1
NP_001011407.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001011407.1NP_001011407.1  dolichol-phosphate mannosyltransferase subunit 1

    See identical proteins and their annotated locations for NP_001011407.1

    Status: PROVISIONAL

    Source sequence(s)
    BC088776
    UniProtKB/TrEMBL
    A0A6I8QPF0, Q5M793
    Related
    ENSXETP00000071491.2, ENSXETT00000072289.2
    Conserved Domains (1) summary
    PLN02726
    Location:1247
    PLN02726; dolichyl-phosphate beta-D-mannosyltransferase

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030686.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    35634170..35646731
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)