npl N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase) [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: nplprovided by Xenbase
Official Full Name: N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)provided by Xenbase
Primary source: Xenbase:XB-GENE-978364
See related: Ensembl:ENSXETG00000012514 AllianceGenome:Xenbase:XB-GENE-978364
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as: c112; npl1; npl-a; npl-b; dhdps1
Summary: Predicted to enable N-acetylneuraminate lyase activity. Predicted to be involved in N-acetylneuraminate catabolic process. Predicted to be located in cytoplasm. Orthologous to human NPL (N-acetylneuraminate pyruvate lyase). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 4

Exon count:: 13

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	4	NC_030680.2 (100177276..100188847, complement)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	4	NC_030680.1 (89961816..89973525, complement)

Chromosome 4 - NC_030680.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables N-acetylneuraminate lyase activity	IBA Inferred from Biological aspect of Ancestor more info
enables N-acetylneuraminate lyase activity	IEA Inferred from Electronic Annotation more info
enables N-acetylneuraminate lyase activity	ISS Inferred from Sequence or Structural Similarity more info
enables lyase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in N-acetylneuraminate catabolic process	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within N-acetylneuraminate catabolic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within N-acetylneuraminate catabolic process	ISS Inferred from Sequence or Structural Similarity more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: N-acetylneuraminate lyase

Names: N-acetylneuraminate pyruvate-lyase; N-acetylneuraminic acid aldolase; NALase; sialate lyase; sialate-pyruvate lyase; sialic acid aldolase; sialic acid lyase

NP_001011207.1

EC 4.1.3.3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.