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cldn12.S claudin 12 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 496360, updated on 4-Nov-2024

Summary

Official Symbol
cldn12.S
Official Full Name
claudin 12 S homeolog
Primary source
Xenbase:XB-GENE-974243
Locus tag
XELAEV_18032938mg
See related
EnsemblRapid:ENSXLAG00005030681 AllianceGenome:Xenbase:XB-GENE-974243
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
cldn12; claudin-12
Summary
Predicted to be located in bicellular tight junction and plasma membrane. Orthologous to human CLDN12 (claudin 12). [provided by Alliance of Genome Resources, Nov 2024]
Annotation information
Annotation category: partial on reference assembly
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Genomic context

See cldn12.S in Genome Data Viewer
Location:
chromosome: 6S
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6S NC_054382.1 (22135450..22141948)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6S NC_030735.1 (21788124..21794361)

Chromosome 6S - NC_054382.1Genomic Context describing neighboring genes Neighboring gene protein FAM237A-like Neighboring gene GTP-binding protein 10 (putative) S homeolog Neighboring gene disintegrin and metalloproteinase domain-containing protein 22-like Neighboring gene RUN domain containing 3B S homeolog Neighboring gene carnitine O-octanoyltransferase S homeolog

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095510.1NP_001088979.1  claudin 12 S homeolog

    See identical proteins and their annotated locations for NP_001088979.1

    Status: PROVISIONAL

    Source sequence(s)
    BC088962
    UniProtKB/TrEMBL
    A0A974CJD4, Q5HZM0
    Related
    ENSXLAP00005091818.1, ENSXLAT00005093498.1

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054382.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    22135450..22141948
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)