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eif1ad.L eukaryotic translation initiation factor 1A domain containing L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 496359, updated on 4-Nov-2024

Summary

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Official Symbol
eif1ad.L
Official Full Name
eukaryotic translation initiation factor 1A domain containing L homeolog
Primary source
Xenbase:XB-GENE-6252080
Locus tag
XELAEV_18022314mg
See related
EnsemblRapid:ENSXLAG00005006709 AllianceGenome:Xenbase:XB-GENE-6252080
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
eif1ad
Summary
Predicted to enable RNA binding activity and translation initiation factor activity. Predicted to act upstream of or within translational initiation. Predicted to be located in nucleus. Orthologous to human EIF1AD (eukaryotic translation initiation factor 1A domain containing). [provided by Alliance of Genome Resources, Nov 2024]
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See eif1ad.L in Genome Data Viewer
Location:
chromosome: 4L
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4L NC_054377.1 (30360289..30370074, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4L NC_030730.1 (28520670..28530455, complement)

Chromosome 4L - NC_054377.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108713490 Neighboring gene U4/U6.U5 tri-snRNP-associated protein 1-like Neighboring gene barrier to autointegration nuclear assembly factor 1 L homeolog Neighboring gene cystatin-like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within translational initiation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
probable RNA-binding protein EIF1AD
Names
eukaryotic translation initiation factor 1A domain-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095509.1 → NP_001088978.1  probable RNA-binding protein EIF1AD

    See identical proteins and their annotated locations for NP_001088978.1

    Status: PROVISIONAL

    Source sequence(s)
    BC088961
    UniProtKB/Swiss-Prot
    Q5HZM1
    UniProtKB/TrEMBL
    A0A974D356
    Related
    ENSXLAP00005019814.1, ENSXLAT00005020194.1
    Conserved Domains (1) summary
    cd05792
    Location:25 → 102
    S1_eIF1AD_like; S1_eIF1AD_like: eukaryotic translation initiation factor 1A domain containing protein (eIF1AD)-like, S1-like RNA-binding domain. eIF1AD is also known as MGC11102 protein. Little is known about the function of eIF1AD. S1-like RNA-binding domains are found ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    30360289..30370074 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5HZM1.1 GenPept UniProtKB/Swiss-Prot:Q5HZM1

Gene LinkOut

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